Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AC011611.5-201ENST00000552477 578 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 MIR4303-201ENST00000581299 66 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 SUMO2P14-201ENST00000604488 293 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 HSPA8P4-201ENST00000511877 1920 ntBASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 AL358453.1-201ENST00000422522 250 ntBASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 RPL7P54-201ENST00000438336 674 ntBASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 MTCO1P31-201ENST00000506355 492 ntBASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 MTCO3P44-201ENST00000510977 541 ntBASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 AC087481.2-201ENST00000565492 330 ntBASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 AC024560.3-201ENST00000608482 349 ntBASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 AC090116.1-201ENST00000615679 446 ntBASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
KIAA1549Q9HCM3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 RNU4-78P-201ENST00000410940 126 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AC010099.1-201ENST00000455434 375 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 RNU7-26P-201ENST00000458980 63 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AC093770.1-201ENST00000511559 571 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 RN7SKP219-201ENST00000516825 296 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 RNA5SP364-201ENST00000516938 78 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 SUB1P1-201ENST00000524415 382 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AC140725.3-201ENST00000616193 880 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AL590396.2-201ENST00000636511 1041 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 MTCO1P9-201ENST00000505577 1534 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AL596028.1-201ENST00000326971 197 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 U3.29-201ENST00000391296 212 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AL627390.1-201ENST00000396055 340 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 Z82205.1-201ENST00000428456 297 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 ARF4P4-201ENST00000439608 520 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AC009237.8-201ENST00000445492 379 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AC096751.1-202ENST00000502691 1067 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.61□□□□□ -2.15
KIAA1549Q9HCM3 MTND4P23-201ENST00000447723 1363 ntBASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 AC111188.2-201ENST00000529697 1387 ntBASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 RNU2-17P-201ENST00000410290 190 ntBASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 RNU6-272P-201ENST00000411028 104 ntBASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 AL512504.1-201ENST00000415494 778 ntBASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 IFNA20P-201ENST00000436840 528 ntBASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 HMGN3P1-201ENST00000453847 193 ntBASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 AC074051.3-201ENST00000570238 358 ntBASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 RPS15AP11-201ENST00000594193 385 ntBASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 AC013444.2-201ENST00000603317 787 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms