Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
RNF38Q9H0F5 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RNF38Q9H0F5 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.65□□□□□ -1.66
RNF38Q9H0F5 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RNF38Q9H0F5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RNF38Q9H0F5 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 RNU6-179P-201ENST00000363350 107 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 RNU6-511P-201ENST00000363496 107 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 RNA5SP28-201ENST00000363841 119 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 Y_RNA.452-201ENST00000384202 108 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 RNU6-278P-201ENST00000390945 109 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 RN7SKP58-201ENST00000411010 305 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 RPS12P24-201ENST00000412619 387 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 AC092447.6-201ENST00000414578 210 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 PHBP16-201ENST00000446318 950 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 BTF3P15-201ENST00000455606 336 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 RPS27P27-201ENST00000498779 255 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 RNA5SP454-201ENST00000517231 127 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 DEFB109D-201ENST00000529497 240 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 AC004817.2-201ENST00000561794 651 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 AF038458.1-201ENST00000588406 262 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 BPIFA4P-203ENST00000603168 689 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 AC092747.3-201ENST00000603769 301 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 Z82243.1-201ENST00000609432 473 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 DUSP12P1-201ENST00000612874 516 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 AL590099.1-201ENST00000615276 138 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 MIR8069-1-201ENST00000616627 86 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 MIR8069-2-201ENST00000621412 86 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 AL136964.1-201ENST00000622038 2990 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 AC011155.2-201ENST00000623202 216 ntBASIC4.65□□□□□ -1.67
RNF38Q9H0F5 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RNF38Q9H0F5 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 MIR331-201ENST00000362302 94 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 SNORD113-7-201ENST00000363762 77 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 Y_RNA.193-201ENST00000363979 102 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 RNU2-36P-201ENST00000410361 191 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AC011933.1-201ENST00000413334 321 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AL139396.1-201ENST00000421137 167 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 FABP5P14-201ENST00000437273 393 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AC116533.1-201ENST00000459748 321 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 RNU2-10P-201ENST00000516375 211 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 CYCSP29-201ENST00000533731 318 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 MIR5690-201ENST00000583739 73 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AC104662.1-201ENST00000604448 511 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 HMGN2P28-201ENST00000606102 262 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 MIR6716-201ENST00000613413 80 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AC090337.1-201ENST00000579651 2074 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AL138713.1-201ENST00000624026 2130 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AL356489.2-201ENST00000566968 3528 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 AL049641.1-201ENST00000441055 1948 ntBASIC4.64□□□□□ -1.67
RNF38Q9H0F5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms