Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.18□□□□□ -2.06
TRIM4Q9C037 AC009318.2-201ENST00000610917 651 ntBASIC2.18□□□□□ -2.06
TRIM4Q9C037 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.18□□□□□ -2.06
TRIM4Q9C037 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.18□□□□□ -2.06
TRIM4Q9C037 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRIM4Q9C037 MTND5P31-201ENST00000419366 1374 ntBASIC2.18□□□□□ -2.06
TRIM4Q9C037 AC087359.1-201ENST00000508335 1740 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRIM4Q9C037 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TRIM4Q9C037 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
TRIM4Q9C037 RNU2-17P-201ENST00000410290 190 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.17□□□□□ -2.06
TRIM4Q9C037 RPP40P1-201ENST00000426762 456 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.17□□□□□ -2.06
TRIM4Q9C037 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
TRIM4Q9C037 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.17□□□□□ -2.06
TRIM4Q9C037 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.17□□□□□ -2.06
TRIM4Q9C037 PNPLA4P1-201ENST00000458328 305 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 RNU1-40P-201ENST00000516816 164 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 RNU1-97P-201ENST00000516872 164 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.17□□□□□ -2.06
TRIM4Q9C037 HIGD1AP6-201ENST00000521833 279 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 CYCSP26-201ENST00000534107 320 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.17□□□□□ -2.06
TRIM4Q9C037 OR1M4P-201ENST00000589199 287 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 AC011494.1-201ENST00000596454 237 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 AC008749.1-201ENST00000597650 306 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 AC016542.1-201ENST00000608259 493 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 AC021851.1-201ENST00000608537 1082 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 AL161629.2-201ENST00000615347 275 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 HMGB1P24-202ENST00000615653 685 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.17□□□□□ -2.06
TRIM4Q9C037 AC027309.3-201ENST00000623419 351 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 AP003400.6-201ENST00000624698 740 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 AC083865.1-201ENST00000636634 831 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 MFSD8-245ENST00000641743 948 ntBASIC2.17□□□□□ -2.06
TRIM4Q9C037 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 RNU6-1339P-201ENST00000363574 91 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 RNU6-921P-201ENST00000384361 107 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 SNORA67.3-201ENST00000384366 140 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 MIR649-201ENST00000384843 97 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL136372.1-201ENST00000403060 228 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 NDUFA5P4-201ENST00000436704 385 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 TAF9P1-201ENST00000445421 515 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 COX6CP12-201ENST00000446748 202 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 HMGN1P5-201ENST00000448591 263 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 TAF9P2-201ENST00000454958 515 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 NAP1L1P3-201ENST00000462291 880 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 RPS27P26-201ENST00000494583 239 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 AC004217.3-201ENST00000551552 878 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL670379.6-201ENST00000603753 252 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL670379.11-201ENST00000604059 253 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL670379.10-201ENST00000604330 253 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AC008162.1-201ENST00000604718 254 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL670379.1-201ENST00000604752 252 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL670379.2-201ENST00000604983 252 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL670379.5-201ENST00000605253 252 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL670379.4-201ENST00000605279 254 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL670379.12-201ENST00000605291 253 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL670379.8-201ENST00000605353 252 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL670379.9-201ENST00000605428 253 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL670379.7-201ENST00000605823 252 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 AC103710.2-201ENST00000609912 942 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL162373.1-201ENST00000620433 407 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 MIR6766-201ENST00000622641 72 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TRIM4Q9C037 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 AL354685.2-201ENST00000448218 1447 ntBASIC2.16□□□□□ -2.06
TRIM4Q9C037 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.16□□□□□ -2.06
TRIM4Q9C037 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.15□□□□□ -2.06
TRIM4Q9C037 AC008669.1-201ENST00000565823 2178 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 AC130650.2-201ENST00000618736 2403 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 SNORA27.3-201ENST00000364937 134 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 RNU6-198P-201ENST00000384258 104 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 HMGB1P11-201ENST00000413899 637 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 MTCO3P30-201ENST00000426425 670 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 AC108667.1-201ENST00000428618 249 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 AC012497.1-201ENST00000429392 575 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 MTCO1P57-201ENST00000432182 261 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 RNF2P1-201ENST00000442955 1010 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 RPL23AP7-203ENST00000449021 469 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 PSPHP1-201ENST00000450062 261 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 RPS20P24-201ENST00000457473 361 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 RNA5SP233-201ENST00000459153 113 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms