Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 AP002512.4-202ENST00000641599 4530 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 AL353796.1-201ENST00000561542 3241 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 AC007159.1-201ENST00000566529 4706 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 RNU6-933P-201ENST00000384424 107 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 MIR491-201ENST00000384877 84 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 RN7SKP114-201ENST00000410327 279 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 YME1L1P1-201ENST00000429435 297 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 CYCTP-201ENST00000504253 315 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 RNA5SP43-201ENST00000516559 110 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 AC025755.1-201ENST00000521306 278 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 AC011471.1-201ENST00000585766 187 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 AC006254.2-201ENST00000603259 279 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 AC174048.1-201ENST00000603389 144 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 AL670379.2-201ENST00000604983 252 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 AC084757.4-201ENST00000616350 526 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 SNHG22-203ENST00000617833 660 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 IGHVIII-44-202ENST00000636235 289 ntBASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL25A1Q9BXS0 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 AL391516.1-201ENST00000554380 2449 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 SNORA63.4-201ENST00000362763 126 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 RNU1-146P-201ENST00000364015 165 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 SNORD113.2-201ENST00000364166 89 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 RNU6-701P-201ENST00000384059 107 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 MIR186-201ENST00000384988 86 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 RPS26P8-201ENST00000393490 348 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 RPL7AP25-201ENST00000423357 805 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 RAB28P5-201ENST00000427490 651 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 TOMM20P4-201ENST00000427861 435 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 GAPDHP27-201ENST00000447427 1020 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 AL162739.1-201ENST00000450606 307 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 RPL23AP65-201ENST00000475608 468 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 ENPP7P9-201ENST00000514456 627 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 RNA5SP272-201ENST00000516095 111 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 AC087369.1-201ENST00000520775 996 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 AC023824.2-201ENST00000566185 400 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 AC006077.1-201ENST00000604746 343 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 AC240442.1-201ENST00000616055 283 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 AC112243.1-201ENST00000623949 3851 ntBASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL25A1Q9BXS0 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 MTND5P9-201ENST00000503854 1755 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 AL590240.1-201ENST00000334118 313 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 Y_RNA.71-201ENST00000362892 104 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 Y_RNA.308-201ENST00000365043 101 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 SNORD116-14-201ENST00000383894 92 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 SNORD116-17-201ENST00000383929 92 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 RNU6-1226P-201ENST00000384317 107 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 SNORD116-15-201ENST00000384445 92 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 SNORD116-20-201ENST00000384529 92 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 RNU6-225P-201ENST00000384613 103 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 SNORD116-19-201ENST00000384729 92 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 SNORA66-201ENST00000384792 133 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 MIR569-201ENST00000385228 96 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms