Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RPL37P6-201ENST00000460682 294 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 RPL22P13-201ENST00000493291 347 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 AC009901.1-201ENST00000506703 541 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 SNORA31.3-201ENST00000516029 96 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 RN7SKP60-201ENST00000516985 239 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 RNU6-388P-201ENST00000517012 105 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 RNU6-389P-201ENST00000517048 105 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 AC024940.3-201ENST00000538551 316 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 AC091516.1-201ENST00000549191 703 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 NDUFB4P11-201ENST00000560510 395 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 AC107871.2-201ENST00000612894 502 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 AC099669.2-201ENST00000616549 437 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 SOCS5P3-201ENST00000425115 1576 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 U8.4-201ENST00000363626 134 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 Y_RNA.307-201ENST00000365022 117 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 RNU6-882P-201ENST00000391025 103 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 RN7SKP213-201ENST00000410746 298 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 EIF4EP1-201ENST00000422311 642 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 AL645568.3-201ENST00000433683 316 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 AL591212.2-201ENST00000433923 257 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 PTMAP3-201ENST00000447474 330 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 CYCSP34-201ENST00000458172 304 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 AL591473.1-201ENST00000464297 313 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 BX284632.1-201ENST00000478218 541 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 RPL31P60-201ENST00000478450 367 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 AC090686.1-201ENST00000481577 749 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 RPS27AP13-201ENST00000498403 237 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 RNY3P15-201ENST00000516297 97 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 Y_RNA.689-201ENST00000516589 107 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 RNA5SP384-201ENST00000516615 116 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 AC022616.4-201ENST00000522985 181 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 AC022882.1-201ENST00000532142 501 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 AC025423.5-201ENST00000550230 219 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 MIR4458-201ENST00000578872 75 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 BDH2P1-201ENST00000602288 736 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 AC024940.4-201ENST00000605507 246 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 AL606534.2-204ENST00000635008 178 ntBASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM56Q9BRZ2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 MIR765-201ENST00000390226 114 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 RNU6-823P-201ENST00000391042 103 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AL139039.1-201ENST00000401900 692 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 RPS4XP7-201ENST00000406274 780 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 RN7SKP125-201ENST00000410481 302 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 RNU6-55P-201ENST00000411092 107 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 RPL36AP10-201ENST00000421785 322 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 UBE2V1P4-201ENST00000425374 344 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AC097713.2-201ENST00000430199 356 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 RPS29P9-201ENST00000440360 171 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 NOTCH2P1-201ENST00000443481 624 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AC087884.1-201ENST00000469738 328 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 VN1R105P-201ENST00000486595 910 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 RN7SL346P-201ENST00000491561 294 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 RN7SL441P-201ENST00000492388 296 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 CEACAMP10-202ENST00000495431 496 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AC107222.1-201ENST00000510899 637 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AC126177.3-201ENST00000551839 688 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AL390726.5-202ENST00000564800 256 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms