Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LCN1P2-201ENST00000372030 223 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 RNU6-166P-201ENST00000384371 107 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 RNU6-541P-201ENST00000384709 110 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 RNA5SP156-201ENST00000410250 110 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 U3.43-201ENST00000410734 213 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 PNKDP1-201ENST00000435914 430 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 CYCSP32-201ENST00000440548 321 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.46□□□□□ -1.54
USB1Q9BQ65 PPIAP27-201ENST00000453800 265 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 RANP2-201ENST00000456833 229 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 AC114982.1-201ENST00000469402 321 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 AC010409.1-201ENST00000487382 476 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 HMGB3P3-201ENST00000510526 400 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 AC108043.1-201ENST00000512696 574 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 Y_RNA.719-201ENST00000517156 106 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 AC027369.5-201ENST00000533838 755 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.46□□□□□ -1.54
USB1Q9BQ65 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.46□□□□□ -1.54
USB1Q9BQ65 AL359881.1-201ENST00000602916 267 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 AL133393.1-201ENST00000603277 287 ntBASIC5.46□□□□□ -1.54
USB1Q9BQ65 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
USB1Q9BQ65 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.46□□□□□ -1.54
USB1Q9BQ65 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.46□□□□□ -1.54
USB1Q9BQ65 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
USB1Q9BQ65 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.46□□□□□ -1.54
USB1Q9BQ65 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
USB1Q9BQ65 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.46□□□□□ -1.54
USB1Q9BQ65 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
USB1Q9BQ65 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.46□□□□□ -1.54
USB1Q9BQ65 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
USB1Q9BQ65 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USB1Q9BQ65 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
USB1Q9BQ65 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
USB1Q9BQ65 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USB1Q9BQ65 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USB1Q9BQ65 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
USB1Q9BQ65 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
USB1Q9BQ65 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USB1Q9BQ65 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
USB1Q9BQ65 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USB1Q9BQ65 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
USB1Q9BQ65 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
USB1Q9BQ65 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
USB1Q9BQ65 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.45□□□□□ -1.54
USB1Q9BQ65 SNORA21-201ENST00000362423 132 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 RNU6-78P-201ENST00000362897 107 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.45□□□□□ -1.54
USB1Q9BQ65 RNU6-1286P-201ENST00000383871 107 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 EIF4A1P11-201ENST00000451239 222 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 snoU109.2-201ENST00000459316 135 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 RPS4XP22-201ENST00000480755 780 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 RPL23AP49-201ENST00000492925 468 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 RNA5SP272-201ENST00000516095 111 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 AC073916.1-201ENST00000545095 130 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 MIR4782-201ENST00000577987 79 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 MIR3684-201ENST00000579779 74 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 SNORD84-203ENST00000584275 78 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.45□□□□□ -1.54
USB1Q9BQ65 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USB1Q9BQ65 MIR6071-201ENST00000616741 78 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 AC131238.1-201ENST00000617135 328 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 AC022400.9-201ENST00000623633 273 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.45□□□□□ -1.54
USB1Q9BQ65 MIR1910-201ENST00000636955 80 ntBASIC5.45□□□□□ -1.54
USB1Q9BQ65 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.45□□□□□ -1.54
USB1Q9BQ65 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
USB1Q9BQ65 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
USB1Q9BQ65 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USB1Q9BQ65 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
USB1Q9BQ65 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
USB1Q9BQ65 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
USB1Q9BQ65 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
USB1Q9BQ65 AL138820.1-201ENST00000617901 5305 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.44□□□□□ -1.54
USB1Q9BQ65 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
USB1Q9BQ65 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USB1Q9BQ65 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
USB1Q9BQ65 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
USB1Q9BQ65 RNU6-961P-201ENST00000363893 105 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 RNU4-84P-201ENST00000364200 139 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 RNU6-153P-201ENST00000364422 104 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 RN7SKP275-201ENST00000364626 301 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
USB1Q9BQ65 MIR1282-201ENST00000408865 101 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 RNU4-34P-201ENST00000410431 124 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.44□□□□□ -1.54
USB1Q9BQ65 RPL12P12-201ENST00000424633 501 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 WARS2P1-201ENST00000429678 537 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.44□□□□□ -1.54
USB1Q9BQ65 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.44□□□□□ -1.54
USB1Q9BQ65 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.44□□□□□ -1.54
USB1Q9BQ65 NUTF2P7-201ENST00000453086 375 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 AL035690.1-201ENST00000490892 383 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.44□□□□□ -1.54
USB1Q9BQ65 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.44□□□□□ -1.54
USB1Q9BQ65 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.44□□□□□ -1.54
USB1Q9BQ65 AP005639.1-201ENST00000526939 192 ntBASIC5.44□□□□□ -1.54
USB1Q9BQ65 AP000620.1-201ENST00000527147 504 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms