Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RANP9-201ENST00000519957 271 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.92□□□□□ -1.94
SSX3Q99909 DUXAP5-201ENST00000529668 529 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AP000857.1-201ENST00000532151 543 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 OR5B10P-201ENST00000532869 642 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.92□□□□□ -1.94
SSX3Q99909 AL133153.1-201ENST00000557756 303 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AC008507.1-201ENST00000587506 734 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AF038458.1-201ENST00000588406 262 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AC020895.1-201ENST00000595362 272 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.92□□□□□ -1.94
SSX3Q99909 AC078899.3-201ENST00000599065 212 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AC007038.2-201ENST00000608095 740 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SSX3Q99909 AC004777.1-201ENST00000624317 287 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.92□□□□□ -1.94
SSX3Q99909 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.92□□□□□ -1.94
SSX3Q99909 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SSX3Q99909 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
SSX3Q99909 AC007823.1-201ENST00000569932 1566 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
SSX3Q99909 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SSX3Q99909 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSX3Q99909 U3.11-201ENST00000364476 212 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SSX3Q99909 RNU6-1035P-201ENST00000384477 107 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 Y_RNA.560-201ENST00000384689 102 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AC110754.1-201ENST00000399740 601 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.91□□□□□ -1.94
SSX3Q99909 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.91□□□□□ -1.94
SSX3Q99909 AP000907.1-201ENST00000428428 510 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AC109583.1-201ENST00000432156 268 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AC244505.4-201ENST00000434905 287 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 SSXP5-201ENST00000443473 287 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.91□□□□□ -1.94
SSX3Q99909 UBBP3-201ENST00000445497 241 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 GAPDHP27-201ENST00000447427 1020 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.91□□□□□ -1.94
SSX3Q99909 CYCSP35-201ENST00000451978 304 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.91□□□□□ -1.94
SSX3Q99909 PRSS3P4-201ENST00000453323 162 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AC092798.1-201ENST00000458542 409 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 RNU7-59P-201ENST00000459101 61 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 RPS20P20-201ENST00000460498 340 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 RPL23AP41-201ENST00000484754 458 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 LARP1BP2-201ENST00000486594 519 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AC055855.1-201ENST00000489563 579 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.91□□□□□ -1.94
SSX3Q99909 AC026407.1-201ENST00000518369 204 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.91□□□□□ -1.94
SSX3Q99909 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.91□□□□□ -1.94
SSX3Q99909 AP002748.2-201ENST00000528671 348 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.91□□□□□ -1.94
SSX3Q99909 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.91□□□□□ -1.94
SSX3Q99909 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.91□□□□□ -1.94
SSX3Q99909 HMGB1P6-201ENST00000569046 646 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AC005951.2-201ENST00000576282 495 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 MIR3922-201ENST00000585192 84 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AP000403.1-201ENST00000603349 851 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 OR10AB1P-201ENST00000609613 938 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 MIR7851-201ENST00000610611 160 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.91□□□□□ -1.94
SSX3Q99909 AC122133.1-201ENST00000613964 233 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AC013476.2-201ENST00000614456 459 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 MIR7844-201ENST00000616161 122 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AL357559.1-201ENST00000622228 274 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AL732618.1-201ENST00000623251 301 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AP003485.2-201ENST00000623636 610 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AC120349.3-201ENST00000624377 529 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.91□□□□□ -1.94
SSX3Q99909 AC127502.3-201ENST00000636170 1206 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AL732372.2-225ENST00000642124 456 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 AL356274.2-201ENST00000624379 3752 ntBASIC2.91□□□□□ -1.94
SSX3Q99909 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SSX3Q99909 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.91□□□□□ -1.94
SSX3Q99909 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.91□□□□□ -1.94
SSX3Q99909 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
SSX3Q99909 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.9□□□□□ -1.94
SSX3Q99909 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
SSX3Q99909 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SSX3Q99909 MTCO1P12-201ENST00000414273 1543 ntBASIC2.9□□□□□ -1.95
SSX3Q99909 AL049641.1-201ENST00000441055 1948 ntBASIC2.9□□□□□ -1.95
SSX3Q99909 AC007785.2-201ENST00000598627 1916 ntBASIC2.9□□□□□ -1.95
SSX3Q99909 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SSX3Q99909 RN7SKP220-201ENST00000410611 288 ntBASIC2.9□□□□□ -1.95
SSX3Q99909 RNU4-72P-201ENST00000410754 173 ntBASIC2.9□□□□□ -1.95
SSX3Q99909 RNA5SP344-201ENST00000411081 104 ntBASIC2.9□□□□□ -1.95
SSX3Q99909 BMS1P22-201ENST00000414726 313 ntBASIC2.9□□□□□ -1.95
SSX3Q99909 Z85995.1-201ENST00000415547 335 ntBASIC2.9□□□□□ -1.95
SSX3Q99909 AC099548.1-201ENST00000421443 426 ntBASIC2.9□□□□□ -1.95
SSX3Q99909 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.9□□□□□ -1.95
SSX3Q99909 BX890604.2-201ENST00000427883 474 ntBASIC2.9□□□□□ -1.95
SSX3Q99909 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.9□□□□□ -1.95
SSX3Q99909 AL365184.2-201ENST00000431139 435 ntBASIC2.9□□□□□ -1.95
SSX3Q99909 RPS6P15-201ENST00000431996 751 ntBASIC2.9□□□□□ -1.95
SSX3Q99909 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.9□□□□□ -1.95
SSX3Q99909 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.9□□□□□ -1.95
SSX3Q99909 NDUFB1P1-201ENST00000435191 180 ntBASIC2.9□□□□□ -1.95
SSX3Q99909 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.9□□□□□ -1.95
SSX3Q99909 MTCO3P45-201ENST00000443036 613 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms