Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.27□□□□□ -2.05
VAT1Q99536 AC104435.1-201ENST00000483483 166 ntBASIC2.27□□□□□ -2.05
VAT1Q99536 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.27□□□□□ -2.05
VAT1Q99536 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.27□□□□□ -2.05
VAT1Q99536 RNU1-103P-201ENST00000516502 125 ntBASIC2.27□□□□□ -2.05
VAT1Q99536 RNA5SP281-201ENST00000516504 135 ntBASIC2.27□□□□□ -2.05
VAT1Q99536 RNA5SP82-201ENST00000516707 92 ntBASIC2.27□□□□□ -2.05
VAT1Q99536 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.27□□□□□ -2.05
VAT1Q99536 SNRPGP18-201ENST00000553000 214 ntBASIC2.27□□□□□ -2.05
VAT1Q99536 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.27□□□□□ -2.05
VAT1Q99536 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.27□□□□□ -2.05
VAT1Q99536 AC103810.1-201ENST00000579873 453 ntBASIC2.27□□□□□ -2.05
VAT1Q99536 MIR4672-201ENST00000583126 81 ntBASIC2.27□□□□□ -2.05
VAT1Q99536 AL121917.1-203ENST00000605534 577 ntBASIC2.27□□□□□ -2.05
VAT1Q99536 AL592148.2-201ENST00000612210 372 ntBASIC2.27□□□□□ -2.05
VAT1Q99536 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VAT1Q99536 AL118556.2-201ENST00000614375 824 ntBASIC2.27□□□□□ -2.05
VAT1Q99536 UCA1.1-201ENST00000620952 75 ntBASIC2.27□□□□□ -2.05
VAT1Q99536 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
VAT1Q99536 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
VAT1Q99536 AL160394.1-201ENST00000624765 724 ntBASIC2.27□□□□□ -2.05
VAT1Q99536 OR5H6-203ENST00000642105 978 ntBASIC2.27□□□□□ -2.05
VAT1Q99536 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VAT1Q99536 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
VAT1Q99536 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.27□□□□□ -2.05
VAT1Q99536 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
VAT1Q99536 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VAT1Q99536 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VAT1Q99536 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VAT1Q99536 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 RNU6-1035P-201ENST00000384477 107 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 SNORA80E-201ENST00000384744 137 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 SNRPEP2-201ENST00000397592 279 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 AL592310.1-201ENST00000414330 671 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VAT1Q99536 NDUFB4P7-201ENST00000423198 363 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 UBE2D3P3-201ENST00000426992 425 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 AC092427.1-202ENST00000430569 476 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.26□□□□□ -2.05
VAT1Q99536 HIGD1AP2-201ENST00000446367 280 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 AC092155.2-201ENST00000454675 477 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 HSPE1P6-201ENST00000479457 291 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 RPL23AP49-201ENST00000492925 468 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.26□□□□□ -2.05
VAT1Q99536 RNU6-334P-201ENST00000517072 102 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 SNORA31.22-201ENST00000517204 135 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.26□□□□□ -2.05
VAT1Q99536 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.26□□□□□ -2.05
VAT1Q99536 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VAT1Q99536 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VAT1Q99536 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.26□□□□□ -2.05
VAT1Q99536 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.26□□□□□ -2.05
VAT1Q99536 SNRPGP1-201ENST00000553864 222 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 DNAJC19P3-201ENST00000594491 331 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 AL136363.1-201ENST00000605349 337 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 DUXAP10-204ENST00000612052 616 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 AL450472.3-201ENST00000615578 367 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 SCARNA15.3-201ENST00000626315 122 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 SCARNA4.1-201ENST00000628597 123 ntBASIC2.26□□□□□ -2.05
VAT1Q99536 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VAT1Q99536 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VAT1Q99536 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
VAT1Q99536 AC005336.3-201ENST00000623833 2679 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
VAT1Q99536 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VAT1Q99536 AC080100.1-201ENST00000624239 5356 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 AC097714.1-201ENST00000511272 1647 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VAT1Q99536 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VAT1Q99536 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
VAT1Q99536 RNU5A-1-201ENST00000362698 116 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 RNU1-105P-201ENST00000363470 161 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 SNORA67.1-201ENST00000364749 141 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 RNU6-76P-201ENST00000384060 104 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 MIR506-201ENST00000384998 124 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 MIR221-201ENST00000385135 110 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 MIR634-201ENST00000385208 97 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.25□□□□□ -2.05
VAT1Q99536 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.25□□□□□ -2.05
VAT1Q99536 MTCYBP3-201ENST00000445588 1137 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.25□□□□□ -2.05
VAT1Q99536 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.25□□□□□ -2.05
VAT1Q99536 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.25□□□□□ -2.05
VAT1Q99536 RNU6-1261P-201ENST00000517194 104 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.25□□□□□ -2.05
VAT1Q99536 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.25□□□□□ -2.05
VAT1Q99536 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.25□□□□□ -2.05
VAT1Q99536 AP003066.2-201ENST00000529375 555 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.25□□□□□ -2.05
VAT1Q99536 AP002770.2-201ENST00000543613 532 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VAT1Q99536 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.25□□□□□ -2.05
VAT1Q99536 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.25□□□□□ -2.05
VAT1Q99536 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.25□□□□□ -2.05
VAT1Q99536 MYL12BP1-201ENST00000569826 507 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 OR1M4P-201ENST00000589199 287 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 AC005776.1-201ENST00000603164 290 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 AL035411.2-201ENST00000604022 421 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 AC004853.1-201ENST00000604902 698 ntBASIC2.25□□□□□ -2.05
VAT1Q99536 AC004852.3-201ENST00000614131 326 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms