Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 ARL4AP2-201ENST00000507378 601 ntBASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 KLHL2P1-201ENST00000508691 521 ntBASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 RAC1P2-201ENST00000511164 579 ntBASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 RNA5SP208-201ENST00000516156 78 ntBASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 RNU6-352P-201ENST00000516908 107 ntBASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 AC123904.3-201ENST00000547218 814 ntBASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 AL133241.1-201ENST00000556832 487 ntBASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 AC098848.2-201ENST00000588023 330 ntBASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 AC020914.4-201ENST00000597690 277 ntBASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 AL606834.2-201ENST00000602954 668 ntBASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 TUG1_2.1-201ENST00000614234 87 ntBASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 AC139792.3-201ENST00000623525 224 ntBASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 AP001148.1-201ENST00000624124 2359 ntBASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDK5RAP3Q96JB5 AC006504.1-201ENST00000562493 3666 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AP004289.2-201ENST00000444413 1457 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 RNU6-1085P-201ENST00000363576 107 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 U1.1-201ENST00000384101 164 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 Y_RNA.450-201ENST00000384198 113 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 RNU6-39P-201ENST00000384344 107 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 MIR30B-201ENST00000384850 88 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 PTMAP5-201ENST00000393073 333 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 CIR1P3-201ENST00000405137 479 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AC007390.1-201ENST00000415722 356 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 DUTP6-201ENST00000425573 462 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AC090774.1-201ENST00000435925 246 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 RPS29P7-201ENST00000439662 171 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AL162389.1-201ENST00000449233 177 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AC140076.1-201ENST00000449897 361 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AL136097.1-201ENST00000456945 913 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AC092989.1-201ENST00000481235 277 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 FAM60DP-201ENST00000524174 632 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 SNRPGP16-201ENST00000533275 226 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AC128657.1-201ENST00000549459 145 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 HMGB1P33-201ENST00000563485 527 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AC092325.1-201ENST00000566449 554 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 GLUD1P4-201ENST00000590914 418 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AL109618.2-201ENST00000605527 211 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AC017083.3-201ENST00000609955 700 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AC007014.2-201ENST00000615581 479 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 AC009161.2-201ENST00000624626 138 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 NCAPGP1-201ENST00000505112 1814 ntBASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CDK5RAP3Q96JB5 RNU6-108P-201ENST00000365558 107 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 DEFB109C-201ENST00000382575 264 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 DEFB109B-201ENST00000382656 264 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 HSPE1P8-201ENST00000406997 288 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 RPL21P24-201ENST00000413752 448 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 MTATP6P18-201ENST00000417994 673 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 AL353193.1-201ENST00000421444 268 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 ELOCP14-201ENST00000428070 331 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 AF228730.2-201ENST00000438784 848 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 SNORA71B-202ENST00000439232 272 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 ELOCP7-201ENST00000439968 331 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 AC016696.1-201ENST00000446949 318 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 MTND2P24-201ENST00000453434 806 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 MTCO3P38-201ENST00000468910 766 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 RNU2-10P-201ENST00000516375 211 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 RN7SKP21-201ENST00000516503 220 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 MIR2114-201ENST00000516645 80 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 Y_RNA.704-201ENST00000516851 102 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 RN7SKP209-201ENST00000516888 304 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 RNU6-410P-201ENST00000517006 107 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 OR5AQ1P-201ENST00000527596 927 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 AP003034.1-201ENST00000534621 422 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 AK6P1-201ENST00000540219 478 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 ARL2BPP2-201ENST00000550907 489 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 AL512360.1-201ENST00000555346 234 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 RPL21P12-201ENST00000559810 515 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 MIR3160-1-201ENST00000577972 85 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 RN7SL703P-201ENST00000578485 302 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 MIR4293-201ENST00000584305 78 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 VN1R85P-201ENST00000601587 426 ntBASIC4.24□□□□□ -1.73
CDK5RAP3Q96JB5 AP001330.4-201ENST00000604350 154 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms