Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 RNA5SP124-201ENST00000362739 110 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 RNVU1-3-201ENST00000364313 161 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 RNU6-534P-201ENST00000364877 106 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 Y_RNA.295-201ENST00000364918 102 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 RNU6-483P-201ENST00000384088 108 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 RNU6-1181P-201ENST00000384191 106 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 RNU6-339P-201ENST00000384310 107 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 MT-TC-201ENST00000387405 66 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AC007390.1-201ENST00000415722 356 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 HMGB3P20-201ENST00000417997 600 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AL139413.1-201ENST00000421309 217 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 RPL21P109-201ENST00000422213 475 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 RPL21P66-201ENST00000426566 466 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 TIMM9P3-201ENST00000428659 274 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AC083863.1-201ENST00000438811 231 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AC132479.1-201ENST00000449160 144 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AL353691.1-201ENST00000451332 387 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 MTND1P12-201ENST00000455231 147 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AP1S2P1-201ENST00000457344 379 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 RNU6-507P-201ENST00000516045 100 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 RNU6-1073P-201ENST00000517182 106 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 IGKV2D-19-201ENST00000523346 262 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AP003497.1-201ENST00000528472 562 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AC109635.3-201ENST00000529536 185 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AC109635.4-202ENST00000531666 412 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 SYF2P1-201ENST00000550658 413 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AL512360.1-201ENST00000555346 234 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 RPL21P12-201ENST00000559810 515 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 MIR3118-1-201ENST00000581787 76 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AC244505.7-201ENST00000599675 272 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AC008536.2-201ENST00000607284 349 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AL591424.2-201ENST00000617023 128 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AL357559.1-201ENST00000622228 274 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AC091953.2-201ENST00000623979 160 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AC079597.1-201ENST00000624306 508 ntBASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATRIPQ8WXE1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 FRG1BP-201ENST00000278882 761 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 Y_RNA.89-201ENST00000363031 102 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 RNU6-876P-201ENST00000391295 104 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 RPL23AP32-201ENST00000395315 459 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 FGF7P8-201ENST00000402994 292 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 MRPL42P2-201ENST00000403169 426 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 RNU4-6P-201ENST00000410804 122 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 AC138393.2-201ENST00000414742 246 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 USP9YP27-201ENST00000418455 438 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 AL159169.1-201ENST00000421119 127 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 AL353193.1-201ENST00000421444 268 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 AC007283.2-201ENST00000424739 197 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 SETP5-201ENST00000437270 562 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 AL049734.2-201ENST00000441066 616 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 AC112653.1-201ENST00000443851 386 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 MTND5P20-201ENST00000448677 143 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 AC104308.1-201ENST00000454621 333 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 snoU13.8-201ENST00000458890 104 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 RPS4XP10-201ENST00000465034 731 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 AC117522.1-201ENST00000509821 380 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 AC114781.4-201ENST00000513707 639 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 RNU6-27P-201ENST00000516146 107 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 Vault.3-201ENST00000516676 95 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 Y_RNA.702-201ENST00000516843 96 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 RNU6-528P-201ENST00000516926 100 ntBASIC4.22□□□□□ -1.73
ATRIPQ8WXE1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms