Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AP000676.3-201ENST00000623299 569 ntBASIC3.08□□□□□ -1.92
CKAP2Q8WWK9 AL356266.1-201ENST00000623311 483 ntBASIC3.08□□□□□ -1.92
CKAP2Q8WWK9 AC027309.3-201ENST00000623419 351 ntBASIC3.08□□□□□ -1.92
CKAP2Q8WWK9 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.08□□□□□ -1.92
CKAP2Q8WWK9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.08□□□□□ -1.92
CKAP2Q8WWK9 LRRC77P-213ENST00000637727 880 ntBASIC3.08□□□□□ -1.92
CKAP2Q8WWK9 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CKAP2Q8WWK9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CKAP2Q8WWK9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CKAP2Q8WWK9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CKAP2Q8WWK9 AC233263.6-201ENST00000631132 1963 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 MIR325-201ENST00000385260 98 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 U8.14-201ENST00000390843 143 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 HMGN1P24-201ENST00000412282 298 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AL451074.5-201ENST00000415894 435 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AC009237.8-201ENST00000445492 379 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 PRSS3P4-201ENST00000453323 162 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 RNU7-125P-201ENST00000458760 62 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 RPL7P49-201ENST00000471402 708 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AP000907.2-201ENST00000530827 353 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AC007954.1-201ENST00000554198 494 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AC008015.1-201ENST00000555505 465 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 RPL21P12-201ENST00000559810 515 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 MIR4307-201ENST00000582802 84 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 MIR3922-201ENST00000585192 84 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AF038458.1-201ENST00000588406 262 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 BNIP3P22-201ENST00000593399 556 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AL031985.2-201ENST00000600955 480 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 PRELID3BP8-201ENST00000604148 295 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AC013553.2-201ENST00000604244 589 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 HSPE1P7-201ENST00000604681 321 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AC107871.2-201ENST00000612894 502 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AC093838.1-201ENST00000613014 469 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 AC004777.1-201ENST00000624317 287 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 MTCO1P12-201ENST00000414273 1543 ntBASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
CKAP2Q8WWK9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 MIR19A-201ENST00000384878 82 ntBASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 TXNP7-201ENST00000406296 293 ntBASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 SNORD88.1-201ENST00000408684 91 ntBASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 VPS26BP1-201ENST00000417155 755 ntBASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 NDUFB4P7-201ENST00000423198 363 ntBASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 AL590383.1-201ENST00000428602 75 ntBASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 LARP1BP3-201ENST00000437229 869 ntBASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 AC092641.1-201ENST00000440229 772 ntBASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 SDAD1P2-201ENST00000441308 2028 ntBASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 CYCSP35-201ENST00000451978 304 ntBASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 AC068587.2-201ENST00000478386 781 ntBASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 AC116347.2-201ENST00000514912 523 ntBASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 SCARNA15.2-201ENST00000516409 127 ntBASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 AC007536.1-201ENST00000533382 349 ntBASIC3.06□□□□□ -1.92
CKAP2Q8WWK9 AC124947.2-202ENST00000552735 133 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms