Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL138827.1-201ENST00000402666 306 ntBASIC3.47□□□□□ -1.85
SNED1Q8TER0 RPL32P35-201ENST00000415214 394 ntBASIC3.47□□□□□ -1.85
SNED1Q8TER0 AC009963.1-201ENST00000417265 157 ntBASIC3.47□□□□□ -1.85
SNED1Q8TER0 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 ZNF863P-201ENST00000426746 417 ntBASIC3.47□□□□□ -1.85
SNED1Q8TER0 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.47□□□□□ -1.85
SNED1Q8TER0 AC093392.2-201ENST00000450682 337 ntBASIC3.47□□□□□ -1.85
SNED1Q8TER0 SSXP1-201ENST00000453640 473 ntBASIC3.47□□□□□ -1.85
SNED1Q8TER0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 DYNLL1P6-201ENST00000503440 264 ntBASIC3.47□□□□□ -1.85
SNED1Q8TER0 AC093281.2-201ENST00000510153 597 ntBASIC3.47□□□□□ -1.85
SNED1Q8TER0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SNED1Q8TER0 RNU2-58P-201ENST00000516403 183 ntBASIC3.47□□□□□ -1.85
SNED1Q8TER0 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 EEF1B2P4-201ENST00000551398 348 ntBASIC3.47□□□□□ -1.85
SNED1Q8TER0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 AC016727.1-205ENST00000605437 569 ntBASIC3.47□□□□□ -1.85
SNED1Q8TER0 AC106028.5-201ENST00000610332 395 ntBASIC3.47□□□□□ -1.85
SNED1Q8TER0 AC023158.2-201ENST00000614876 543 ntBASIC3.47□□□□□ -1.85
SNED1Q8TER0 MIR7844-201ENST00000616161 122 ntBASIC3.47□□□□□ -1.85
SNED1Q8TER0 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SNED1Q8TER0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNED1Q8TER0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNED1Q8TER0 AC004972.1-201ENST00000623934 2209 ntBASIC3.47□□□□□ -1.85
SNED1Q8TER0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SNED1Q8TER0 AC066616.2-201ENST00000559334 1481 ntBASIC3.46□□□□□ -1.85
SNED1Q8TER0 OR56A5-201ENST00000340110 738 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 U3.11-201ENST00000364476 212 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 RNU4-91P-201ENST00000364778 135 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 RNA5SP189-201ENST00000364920 115 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 SNORA46-201ENST00000384762 135 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 SNORD65.1-201ENST00000390889 71 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 MIR1183-201ENST00000408856 89 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 AC245291.1-201ENST00000419501 328 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 OR2AS1P-201ENST00000427827 319 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 MTND1P2-201ENST00000430604 821 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 AC093155.1-201ENST00000440164 826 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 RPS26P30-201ENST00000443431 335 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 EEF1E1P1-201ENST00000446998 430 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 AL162389.1-201ENST00000449233 177 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 RPL23AP35-201ENST00000451906 501 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 OR6C5P-201ENST00000452388 923 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 AC005921.1-201ENST00000510589 286 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 NDUFB4P9-201ENST00000511646 388 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SNED1Q8TER0 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 AC083760.1-201ENST00000589621 670 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 AC007687.1-201ENST00000602704 304 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 MTND5P28-201ENST00000438005 1594 ntBASIC3.46□□□□□ -1.86
SNED1Q8TER0 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SNED1Q8TER0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SNED1Q8TER0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.46□□□□□ -1.86
SNED1Q8TER0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SNED1Q8TER0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SNED1Q8TER0 SNORA31-201ENST00000362607 130 ntBASIC3.45□□□□□ -1.86
SNED1Q8TER0 SNORA4.1-201ENST00000364263 144 ntBASIC3.45□□□□□ -1.86
SNED1Q8TER0 RNU6-259P-201ENST00000383999 107 ntBASIC3.45□□□□□ -1.86
SNED1Q8TER0 MIR887-201ENST00000401258 79 ntBASIC3.45□□□□□ -1.86
SNED1Q8TER0 MTCO3P31-201ENST00000405526 789 ntBASIC3.45□□□□□ -1.86
SNED1Q8TER0 AC069218.2-201ENST00000411665 344 ntBASIC3.45□□□□□ -1.86
SNED1Q8TER0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.45□□□□□ -1.86
SNED1Q8TER0 AC016831.2-201ENST00000417179 352 ntBASIC3.45□□□□□ -1.86
SNED1Q8TER0 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.45□□□□□ -1.86
SNED1Q8TER0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.45□□□□□ -1.86
SNED1Q8TER0 MTND4P28-201ENST00000426217 387 ntBASIC3.45□□□□□ -1.86
SNED1Q8TER0 ISCA1P1-201ENST00000426679 387 ntBASIC3.45□□□□□ -1.86
SNED1Q8TER0 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.45□□□□□ -1.86
SNED1Q8TER0 MTCO2P19-201ENST00000427513 598 ntBASIC3.45□□□□□ -1.86
SNED1Q8TER0 OR51AB1P-201ENST00000429046 620 ntBASIC3.45□□□□□ -1.86
SNED1Q8TER0 CKS1BP5-201ENST00000434172 273 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms