Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 AC011468.4-201ENST00000603942 409 ntBASIC4.35□□□□□ -1.71
SSH3Q8TE77 MIR98-201ENST00000606724 119 ntBASIC4.35□□□□□ -1.71
SSH3Q8TE77 AP001330.5-201ENST00000607176 411 ntBASIC4.35□□□□□ -1.71
SSH3Q8TE77 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.35□□□□□ -1.71
SSH3Q8TE77 AL161734.1-201ENST00000609720 557 ntBASIC4.35□□□□□ -1.71
SSH3Q8TE77 AC009159.1-201ENST00000618386 642 ntBASIC4.35□□□□□ -1.71
SSH3Q8TE77 RMST_9.1-201ENST00000619945 193 ntBASIC4.35□□□□□ -1.71
SSH3Q8TE77 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.35□□□□□ -1.71
SSH3Q8TE77 MIR3662-201ENST00000637030 95 ntBASIC4.35□□□□□ -1.71
SSH3Q8TE77 AC010149.2-201ENST00000637608 315 ntBASIC4.35□□□□□ -1.71
SSH3Q8TE77 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSH3Q8TE77 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSH3Q8TE77 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.34□□□□□ -1.71
SSH3Q8TE77 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSH3Q8TE77 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SSH3Q8TE77 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSH3Q8TE77 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSH3Q8TE77 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.34□□□□□ -1.71
SSH3Q8TE77 Y_RNA.160-201ENST00000363677 92 ntBASIC4.34□□□□□ -1.71
SSH3Q8TE77 RNU6-853P-201ENST00000364306 107 ntBASIC4.34□□□□□ -1.71
SSH3Q8TE77 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.34□□□□□ -1.71
SSH3Q8TE77 RNA5SP189-201ENST00000364920 115 ntBASIC4.34□□□□□ -1.71
SSH3Q8TE77 RNA5SP235-201ENST00000365411 114 ntBASIC4.34□□□□□ -1.71
SSH3Q8TE77 MIR200C-201ENST00000384980 68 ntBASIC4.34□□□□□ -1.71
SSH3Q8TE77 MIR449B-201ENST00000384995 97 ntBASIC4.34□□□□□ -1.71
SSH3Q8TE77 SNORD17-201ENST00000390930 237 ntBASIC4.34□□□□□ -1.71
SSH3Q8TE77 RNU6-1009P-201ENST00000390996 107 ntBASIC4.34□□□□□ -1.71
SSH3Q8TE77 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.34□□□□□ -1.71
SSH3Q8TE77 AL356776.1-201ENST00000406574 447 ntBASIC4.34□□□□□ -1.71
SSH3Q8TE77 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.34□□□□□ -1.71
SSH3Q8TE77 RN7SKP111-201ENST00000410349 271 ntBASIC4.34□□□□□ -1.71
SSH3Q8TE77 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.34□□□□□ -1.71
SSH3Q8TE77 MTCO2P5-201ENST00000422621 426 ntBASIC4.34□□□□□ -1.71
SSH3Q8TE77 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.34□□□□□ -1.71
SSH3Q8TE77 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.34□□□□□ -1.71
SSH3Q8TE77 AC110768.1-201ENST00000509222 400 ntBASIC4.34□□□□□ -1.71
SSH3Q8TE77 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.34□□□□□ -1.71
SSH3Q8TE77 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.34□□□□□ -1.71
SSH3Q8TE77 CBX3P5-201ENST00000552017 521 ntBASIC4.34□□□□□ -1.71
SSH3Q8TE77 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.34□□□□□ -1.71
SSH3Q8TE77 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.34□□□□□ -1.71
SSH3Q8TE77 AL355812.1-201ENST00000603215 216 ntBASIC4.34□□□□□ -1.71
SSH3Q8TE77 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.34□□□□□ -1.71
SSH3Q8TE77 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.34□□□□□ -1.71
SSH3Q8TE77 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSH3Q8TE77 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSH3Q8TE77 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.34□□□□□ -1.71
SSH3Q8TE77 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SSH3Q8TE77 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.34□□□□□ -1.71
SSH3Q8TE77 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSH3Q8TE77 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SSH3Q8TE77 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.34□□□□□ -1.72
SSH3Q8TE77 OTUD4P1-201ENST00000237841 3067 ntBASIC4.34□□□□□ -1.72
SSH3Q8TE77 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.34□□□□□ -1.72
SSH3Q8TE77 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SSH3Q8TE77 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSH3Q8TE77 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSH3Q8TE77 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.33□□□□□ -1.72
SSH3Q8TE77 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.33□□□□□ -1.72
SSH3Q8TE77 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC092447.10-201ENST00000620607 1652 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SSH3Q8TE77 RNA5SP119-201ENST00000362715 117 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 Y_RNA.159-201ENST00000363674 87 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 RNVU1-3-201ENST00000364313 161 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 RNU6-837P-201ENST00000391056 108 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC078974.1-201ENST00000411597 223 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC068533.1-201ENST00000418542 415 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 ZNF90P2-204ENST00000419323 1075 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 AL353193.1-201ENST00000421444 268 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC073063.1-201ENST00000434352 607 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.33□□□□□ -1.72
SSH3Q8TE77 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.33□□□□□ -1.72
SSH3Q8TE77 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.33□□□□□ -1.72
SSH3Q8TE77 HSPE1P28-201ENST00000443139 211 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 RPL23AP20-201ENST00000447965 421 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC005297.2-201ENST00000450430 606 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC104073.1-201ENST00000451988 151 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.33□□□□□ -1.72
SSH3Q8TE77 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.33□□□□□ -1.72
SSH3Q8TE77 RPL21P129-201ENST00000491732 478 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC078918.1-201ENST00000498515 228 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC005921.1-201ENST00000510589 286 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 RNU6-1281P-201ENST00000516223 105 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 RNU2-58P-201ENST00000516403 183 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 Vault.3-201ENST00000516676 95 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 AP003385.6-201ENST00000531603 374 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC007458.1-201ENST00000542812 373 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC123904.2-201ENST00000548059 300 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC009101.1-201ENST00000568135 242 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 MIR1254-2-201ENST00000579553 63 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 MIR4429-201ENST00000580105 73 ntBASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.33□□□□□ -1.72
SSH3Q8TE77 AC007621.1-201ENST00000604544 437 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms