Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.3□□□□□ -2.2
CHD6Q8TD26 uc_338.12-201ENST00000616344 181 ntBASIC1.3□□□□□ -2.2
CHD6Q8TD26 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
CHD6Q8TD26 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CHD6Q8TD26 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.3□□□□□ -2.2
CHD6Q8TD26 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.3□□□□□ -2.2
CHD6Q8TD26 AC008669.1-201ENST00000565823 2178 ntBASIC1.3□□□□□ -2.2
CHD6Q8TD26 VTRNA1-1-201ENST00000363120 99 ntBASIC1.3□□□□□ -2.2
CHD6Q8TD26 BMI1P1-201ENST00000445879 941 ntBASIC1.3□□□□□ -2.2
CHD6Q8TD26 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.3□□□□□ -2.2
CHD6Q8TD26 RNA5SP309-201ENST00000516670 106 ntBASIC1.3□□□□□ -2.2
CHD6Q8TD26 RNU1-40P-201ENST00000516816 164 ntBASIC1.3□□□□□ -2.2
CHD6Q8TD26 RNU1-97P-201ENST00000516872 164 ntBASIC1.3□□□□□ -2.2
CHD6Q8TD26 MIR4419B-201ENST00000577260 68 ntBASIC1.3□□□□□ -2.2
CHD6Q8TD26 MCTS2P-201ENST00000394552 546 ntBASIC1.29□□□□□ -2.2
CHD6Q8TD26 DPPA2P1-201ENST00000428060 556 ntBASIC1.29□□□□□ -2.2
CHD6Q8TD26 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.29□□□□□ -2.2
CHD6Q8TD26 MTCYBP37-201ENST00000510642 1133 ntBASIC1.29□□□□□ -2.2
CHD6Q8TD26 RN7SKP265-201ENST00000516448 223 ntBASIC1.29□□□□□ -2.2
CHD6Q8TD26 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.29□□□□□ -2.2
CHD6Q8TD26 AC097504.2-201ENST00000608088 454 ntBASIC1.29□□□□□ -2.2
CHD6Q8TD26 AC009812.4-201ENST00000569134 1805 ntBASIC1.29□□□□□ -2.2
CHD6Q8TD26 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.29□□□□□ -2.2
CHD6Q8TD26 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CHD6Q8TD26 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CHD6Q8TD26 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.29□□□□□ -2.2
CHD6Q8TD26 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.29□□□□□ -2.2
CHD6Q8TD26 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.29□□□□□ -2.2
CHD6Q8TD26 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.29□□□□□ -2.2
CHD6Q8TD26 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.29□□□□□ -2.2
CHD6Q8TD26 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.29□□□□□ -2.2
CHD6Q8TD26 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.29□□□□□ -2.2
CHD6Q8TD26 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.29□□□□□ -2.2
CHD6Q8TD26 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CHD6Q8TD26 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.28□□□□□ -2.2
CHD6Q8TD26 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CHD6Q8TD26 RNU6-30P-201ENST00000384561 107 ntBASIC1.28□□□□□ -2.2
CHD6Q8TD26 AL033519.2-201ENST00000403958 392 ntBASIC1.28□□□□□ -2.2
CHD6Q8TD26 AC106901.1-201ENST00000425086 698 ntBASIC1.28□□□□□ -2.2
CHD6Q8TD26 WARS2P1-201ENST00000429678 537 ntBASIC1.28□□□□□ -2.2
CHD6Q8TD26 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.28□□□□□ -2.2
CHD6Q8TD26 HMGB3P15-201ENST00000507326 574 ntBASIC1.28□□□□□ -2.2
CHD6Q8TD26 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.28□□□□□ -2.2
CHD6Q8TD26 AC139103.1-201ENST00000534696 1030 ntBASIC1.28□□□□□ -2.2
CHD6Q8TD26 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.28□□□□□ -2.2
CHD6Q8TD26 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.28□□□□□ -2.2
CHD6Q8TD26 AC048347.1-201ENST00000624621 427 ntBASIC1.28□□□□□ -2.2
CHD6Q8TD26 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CHD6Q8TD26 Y_RNA.280-201ENST00000364765 112 ntBASIC1.28□□□□□ -2.2
CHD6Q8TD26 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CHD6Q8TD26 MTCYBP45-201ENST00000435243 565 ntBASIC1.28□□□□□ -2.2
CHD6Q8TD26 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.28□□□□□ -2.2
CHD6Q8TD26 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
CHD6Q8TD26 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.21
CHD6Q8TD26 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.27□□□□□ -2.21
CHD6Q8TD26 PTGES3P5-201ENST00000455109 434 ntBASIC1.27□□□□□ -2.21
CHD6Q8TD26 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.27□□□□□ -2.21
CHD6Q8TD26 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.27□□□□□ -2.21
CHD6Q8TD26 AL031775.1-201ENST00000607014 887 ntBASIC1.27□□□□□ -2.21
CHD6Q8TD26 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CHD6Q8TD26 Y_RNA.457-201ENST00000384237 111 ntBASIC1.27□□□□□ -2.21
CHD6Q8TD26 OR9N1P-202ENST00000494289 481 ntBASIC1.27□□□□□ -2.21
CHD6Q8TD26 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.27□□□□□ -2.21
CHD6Q8TD26 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.27□□□□□ -2.21
CHD6Q8TD26 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.27□□□□□ -2.21
CHD6Q8TD26 AC023050.2-201ENST00000544968 387 ntBASIC1.27□□□□□ -2.21
CHD6Q8TD26 AC074029.2-201ENST00000551045 634 ntBASIC1.27□□□□□ -2.21
CHD6Q8TD26 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.27□□□□□ -2.21
CHD6Q8TD26 GAS5-AS1-201ENST00000602767 694 ntBASIC1.27□□□□□ -2.21
CHD6Q8TD26 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.27□□□□□ -2.21
CHD6Q8TD26 AL158801.5-201ENST00000623123 465 ntBASIC1.27□□□□□ -2.21
CHD6Q8TD26 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
CHD6Q8TD26 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.27□□□□□ -2.21
CHD6Q8TD26 AC099548.1-201ENST00000421443 426 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 HMGB3P10-201ENST00000434734 572 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.26□□□□□ -2.21
CHD6Q8TD26 AP001029.3-201ENST00000588063 596 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 AL135786.2-201ENST00000608422 615 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
CHD6Q8TD26 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.26□□□□□ -2.21
CHD6Q8TD26 RNU4-31P-201ENST00000384211 141 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 Y_RNA.488-201ENST00000384403 102 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 Y_RNA.571-201ENST00000384753 98 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 RNU6-1320P-201ENST00000390838 107 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 RNU6-1269P-201ENST00000391139 107 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 RPL5P19-201ENST00000404228 893 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 HMGB3P31-201ENST00000413333 595 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 RNU6-599P-201ENST00000459383 107 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 RNU6-1193P-201ENST00000459461 107 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 AC012493.3-201ENST00000604494 112 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 RNU6-368P-201ENST00000620928 107 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
CHD6Q8TD26 RNU6-538P-201ENST00000622329 107 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 AC090617.7-201ENST00000623952 126 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.26□□□□□ -2.21
CHD6Q8TD26 AP000560.1-201ENST00000624150 1937 ntBASIC1.26□□□□□ -2.21
CHD6Q8TD26 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.25□□□□□ -2.21
CHD6Q8TD26 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CHD6Q8TD26 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms