Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC108032.1-201ENST00000416706 207 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 CALM2P2-201ENST00000428512 440 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 AL356981.1-201ENST00000454879 684 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 PCMTD1P1-201ENST00000455560 355 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 CYCSP34-201ENST00000458172 304 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 HMGB3P16-201ENST00000508037 287 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 AC096745.1-201ENST00000509945 370 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 RNU5B-3P-201ENST00000516601 115 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 RNU6-1092P-201ENST00000516955 87 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 RNU6-255P-201ENST00000516957 105 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 RNU6-64P-201ENST00000517119 105 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 RNU6-323P-201ENST00000521915 107 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 AC009643.1-201ENST00000532030 391 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 AC026371.1-201ENST00000551867 419 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 AC243654.2-201ENST00000612843 443 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 AC127459.3-201ENST00000624328 466 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 SMG1P6-201ENST00000532337 2930 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 AC093849.1-201ENST00000563631 2209 ntBASIC5□□□□□ -1.61
SHKBP1Q8TBC3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5□□□□□ -1.61
SHKBP1Q8TBC3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 MUC2-202ENST00000613187 4845 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 AL049555.1-201ENST00000562834 1933 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 SNORD27-201ENST00000363981 72 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 Y_RNA.274-201ENST00000364714 101 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 SNORA23-201ENST00000365128 182 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 U3.22-201ENST00000391120 215 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 MIR548H3-201ENST00000408771 118 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 RPL36AP10-201ENST00000421785 322 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 RPL21P109-201ENST00000422213 475 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 AC097713.2-201ENST00000430199 356 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 AL158071.1-201ENST00000430315 461 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 RPS3AP12-201ENST00000443616 753 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 MTCO3P8-201ENST00000453691 755 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 RNA5SP103-201ENST00000459503 118 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 RPS23P7-201ENST00000466210 444 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 AC087884.1-201ENST00000469738 328 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 TRBVB-201ENST00000477100 408 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 RN7SL558P-201ENST00000497468 299 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 RNU1-6P-201ENST00000516290 144 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 RNU6-798P-201ENST00000516912 103 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 RANP3-201ENST00000530970 276 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 AC090517.1-201ENST00000569307 266 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 MIR548AI-201ENST00000579940 88 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 SNORA74C-1-201ENST00000580726 201 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 MIR4293-201ENST00000584305 78 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 RN7SL435P-201ENST00000584418 282 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 CR392039.4-201ENST00000624968 501 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 TLK1P1-201ENST00000456760 2440 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 AL359854.1-201ENST00000614203 1594 ntBASIC4.99□□□□□ -1.61
SHKBP1Q8TBC3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.98□□□□□ -1.61
SHKBP1Q8TBC3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
SHKBP1Q8TBC3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
SHKBP1Q8TBC3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SHKBP1Q8TBC3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHKBP1Q8TBC3 AC139713.2-214ENST00000642059 1811 ntBASIC4.98□□□□□ -1.61
SHKBP1Q8TBC3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SHKBP1Q8TBC3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHKBP1Q8TBC3 RNU4-42P-201ENST00000364738 142 ntBASIC4.98□□□□□ -1.61
SHKBP1Q8TBC3 Y_RNA.297-201ENST00000364950 91 ntBASIC4.98□□□□□ -1.61
SHKBP1Q8TBC3 RNA5SP240-201ENST00000365355 128 ntBASIC4.98□□□□□ -1.61
SHKBP1Q8TBC3 RNU6-190P-201ENST00000384154 102 ntBASIC4.98□□□□□ -1.61
SHKBP1Q8TBC3 RNU6-125P-201ENST00000384505 107 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms