Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 RNU6-564P-201ENST00000410983 104 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AL513331.1-201ENST00000411908 397 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 MTCO3P12-201ENST00000416718 547 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 OR51AB1P-201ENST00000429046 620 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 MTCO1P43-201ENST00000431831 488 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC113155.1-201ENST00000511141 769 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 RNU6ATAC12P-201ENST00000516542 115 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 SNORA31.23-201ENST00000517219 133 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 BTF3P12-201ENST00000519620 469 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC068790.3-201ENST00000602988 553 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 DUXAP9-208ENST00000622815 614 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC244517.12-201ENST00000623581 663 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC097372.4-201ENST00000625025 466 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 NAP1L1P3-201ENST00000462291 880 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC104689.1-201ENST00000473356 768 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AF279873.1-201ENST00000523393 313 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AL049737.1-201ENST00000413920 1403 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 MIR7-1-201ENST00000384871 110 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 MIR1294-201ENST00000408503 142 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 NIFKP8-201ENST00000560500 874 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 uc_338.20-201ENST00000621563 178 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 BX649567.1-201ENST00000642071 1134 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 UBE2L2-201ENST00000254302 429 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 RNU6-989P-201ENST00000362756 107 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 SNORD114-22-201ENST00000365423 72 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 HMGN2P19-201ENST00000425149 265 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AL513321.1-201ENST00000441175 761 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 RPS4XP11-201ENST00000446897 772 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC092155.2-201ENST00000454675 477 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AL139109.1-201ENST00000455491 297 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 RBM43P1-201ENST00000476891 1081 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 RNF138P1-201ENST00000502765 546 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 HMGB1P47-201ENST00000511281 589 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 OSBPL9P3-201ENST00000534523 595 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC008015.1-201ENST00000555505 465 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 RN7SL793P-201ENST00000583259 296 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AL031274.2-201ENST00000599419 203 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC018618.2-201ENST00000604770 446 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AL161734.1-201ENST00000609720 557 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 ZNF876P-202ENST00000398732 1485 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC006499.2-201ENST00000513470 337 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 DNAJC8P1-201ENST00000554535 372 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC010872.1-201ENST00000624225 675 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC068620.4-201ENST00000636730 1182 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 CKAP2P1-201ENST00000555477 2049 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC244098.2-201ENST00000422068 99 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AL590762.3-201ENST00000436372 640 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 RPS29P12-201ENST00000460178 152 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 SNORA48.10-201ENST00000516965 160 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC023158.1-201ENST00000561632 1025 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AL136363.1-201ENST00000605349 337 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 RNU6-37P-201ENST00000362692 107 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 RNU6-11P-201ENST00000364234 107 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 MIR598-201ENST00000384868 97 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 RPL21P32-201ENST00000419877 477 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 HMGN2P21-201ENST00000447764 270 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 MTATP6P22-201ENST00000507369 598 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms