Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 RNY3P13-201ENST00000365542 102 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 RNU4-48P-201ENST00000365559 182 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 SNORD51-201ENST00000384320 80 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 RNU2-62P-201ENST00000410868 191 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 MTCO3P12-201ENST00000416718 547 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 RPS6P12-201ENST00000432491 726 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 RPS20P5-201ENST00000434808 360 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 NOTCH2P1-201ENST00000443481 624 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 RAC1P7-201ENST00000445367 377 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 BX276092.4-201ENST00000452056 248 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 HMGB3P21-201ENST00000452483 547 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 AL163973.1-201ENST00000484753 577 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 RPS3AP50-201ENST00000487064 803 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 TMEM248P1-201ENST00000510579 951 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 MTCO3P44-201ENST00000510977 541 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 COX6CP3-201ENST00000580869 223 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 MIR6075-201ENST00000620782 95 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 MAPK10-253ENST00000641010 4072 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RNF169Q8NCN4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF169Q8NCN4 MARK2P15-201ENST00000432204 2186 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF169Q8NCN4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RNF169Q8NCN4 RNU6-511P-201ENST00000363496 107 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 U3.11-201ENST00000364476 212 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 RNU6-339P-201ENST00000384310 107 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 RNU6-39P-201ENST00000384344 107 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RNF169Q8NCN4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF169Q8NCN4 AL356432.1-201ENST00000405809 419 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 RAB9AP3-201ENST00000412737 573 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 EEF1A1P40-201ENST00000412883 573 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 AL391219.1-201ENST00000422570 483 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF169Q8NCN4 AC006946.1-201ENST00000429106 328 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF169Q8NCN4 AC073415.1-201ENST00000449240 153 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 RAB9AP1-201ENST00000449393 573 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF169Q8NCN4 GMFBP1-201ENST00000467831 427 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF169Q8NCN4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RNF169Q8NCN4 RN7SKP277-201ENST00000516895 283 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 SUB1P1-201ENST00000524415 382 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 AC011979.2-201ENST00000527568 352 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 AC125611.2-201ENST00000551907 647 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF169Q8NCN4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.29□□□□□ -1.72
RNF169Q8NCN4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.29□□□□□ -1.72
RNF169Q8NCN4 AC004908.2-201ENST00000609090 574 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 AC105429.2-201ENST00000610567 517 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 AL132765.2-201ENST00000610812 351 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 AL590099.1-201ENST00000615276 138 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 AL354950.2-201ENST00000617939 290 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF169Q8NCN4 MIR6715B-201ENST00000637172 77 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 PNPT1P2-201ENST00000456768 2050 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF169Q8NCN4 AP004289.2-201ENST00000444413 1457 ntBASIC4.29□□□□□ -1.72
RNF169Q8NCN4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF169Q8NCN4 AL133412.1-201ENST00000380194 2992 ntBASIC4.28□□□□□ -1.72
RNF169Q8NCN4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF169Q8NCN4 HSPE1P11-201ENST00000339579 310 ntBASIC4.28□□□□□ -1.72
RNF169Q8NCN4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF169Q8NCN4 SNORA51.2-201ENST00000364595 132 ntBASIC4.28□□□□□ -1.72
RNF169Q8NCN4 RNU6-996P-201ENST00000365438 107 ntBASIC4.28□□□□□ -1.72
RNF169Q8NCN4 MIR558-201ENST00000384920 94 ntBASIC4.28□□□□□ -1.72
RNF169Q8NCN4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF169Q8NCN4 CYP4F29P-201ENST00000420685 446 ntBASIC4.28□□□□□ -1.72
RNF169Q8NCN4 AC008065.1-201ENST00000428525 348 ntBASIC4.28□□□□□ -1.72
RNF169Q8NCN4 YME1L1P1-201ENST00000429435 297 ntBASIC4.28□□□□□ -1.72
RNF169Q8NCN4 RANP8-201ENST00000444720 713 ntBASIC4.28□□□□□ -1.72
RNF169Q8NCN4 NDUFS5P3-201ENST00000450668 321 ntBASIC4.28□□□□□ -1.72
RNF169Q8NCN4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF169Q8NCN4 AC078785.3-201ENST00000476607 425 ntBASIC4.28□□□□□ -1.72
RNF169Q8NCN4 NIPA2P2-201ENST00000496376 1083 ntBASIC4.28□□□□□ -1.72
RNF169Q8NCN4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF169Q8NCN4 AC006499.6-201ENST00000511169 607 ntBASIC4.28□□□□□ -1.72
RNF169Q8NCN4 RNU6-27P-201ENST00000516146 107 ntBASIC4.28□□□□□ -1.72
RNF169Q8NCN4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.28□□□□□ -1.72
RNF169Q8NCN4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF169Q8NCN4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF169Q8NCN4 AC135001.1-201ENST00000544546 283 ntBASIC4.28□□□□□ -1.72
RNF169Q8NCN4 SETP7-201ENST00000552169 453 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms