Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.58□□□□□ -2
LINC01555Q8NAE3 AP003385.6-201ENST00000531603 374 ntBASIC2.58□□□□□ -2
LINC01555Q8NAE3 AC013828.2-201ENST00000532487 235 ntBASIC2.58□□□□□ -2
LINC01555Q8NAE3 OR6C7P-201ENST00000547875 934 ntBASIC2.58□□□□□ -2
LINC01555Q8NAE3 AC126177.3-201ENST00000551839 688 ntBASIC2.58□□□□□ -2
LINC01555Q8NAE3 AL355836.1-201ENST00000555951 870 ntBASIC2.58□□□□□ -2
LINC01555Q8NAE3 OR4H12P-201ENST00000556269 907 ntBASIC2.58□□□□□ -2
LINC01555Q8NAE3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.58□□□□□ -2
LINC01555Q8NAE3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.58□□□□□ -2
LINC01555Q8NAE3 AC008088.1-201ENST00000580993 280 ntBASIC2.58□□□□□ -2
LINC01555Q8NAE3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.58□□□□□ -2
LINC01555Q8NAE3 XIAPP1-201ENST00000603162 600 ntBASIC2.58□□□□□ -2
LINC01555Q8NAE3 AL035413.2-201ENST00000604801 525 ntBASIC2.58□□□□□ -2
LINC01555Q8NAE3 AC004223.4-201ENST00000612426 332 ntBASIC2.58□□□□□ -2
LINC01555Q8NAE3 AC107871.2-201ENST00000612894 502 ntBASIC2.58□□□□□ -2
LINC01555Q8NAE3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.58□□□□□ -2
LINC01555Q8NAE3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
LINC01555Q8NAE3 AC091931.1-201ENST00000623488 728 ntBASIC2.58□□□□□ -2
LINC01555Q8NAE3 SNORA50A-202ENST00000629536 136 ntBASIC2.58□□□□□ -2
LINC01555Q8NAE3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
LINC01555Q8NAE3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.58□□□□□ -2
LINC01555Q8NAE3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01555Q8NAE3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01555Q8NAE3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01555Q8NAE3 MAPK10-362ENST00000641864 4484 ntBASIC2.58□□□□□ -2
LINC01555Q8NAE3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 AL079305.1-201ENST00000623159 3008 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 RNU6-859P-201ENST00000362728 107 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 RNA5SP258-201ENST00000362750 119 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 SNORD116-2-201ENST00000384274 95 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 SNORD116-8-201ENST00000384365 95 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 Y_RNA.510-201ENST00000384511 114 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 SNORD116-6-201ENST00000384711 96 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 MIR34A-201ENST00000385130 110 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 MIR23A-201ENST00000385245 73 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 AL049545.1-201ENST00000401856 572 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 AL021407.1-201ENST00000404531 386 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 RNU2-47P-201ENST00000410649 186 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 MTATP6P27-201ENST00000416987 621 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 YPEL5P1-201ENST00000419731 367 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 AC019097.1-201ENST00000424783 735 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 AC093151.1-201ENST00000427711 313 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 LARP1BP3-201ENST00000437229 869 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 MTATP6P26-201ENST00000445926 662 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 MRPL50P4-201ENST00000446432 475 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 AP000936.2-201ENST00000447151 681 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 AL109933.2-201ENST00000452651 260 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 RPS24P6-201ENST00000452670 400 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 AC092754.2-201ENST00000463506 460 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 AC010285.1-201ENST00000470580 392 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 AL024509.2-201ENST00000493462 493 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 RPF2P2-201ENST00000504693 896 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 HMGB1P22-201ENST00000505315 124 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 AC006390.1-201ENST00000508068 283 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 RNA5SP76-201ENST00000516277 87 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 RNU6-678P-201ENST00000516832 109 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.57□□□□□ -2
LINC01555Q8NAE3 MIR3915-201ENST00000578518 97 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 MIR4635-201ENST00000583759 79 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 BNIP3P23-201ENST00000599655 511 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 AC012669.1-201ENST00000603209 283 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 Z99497.2-201ENST00000603634 310 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 AL603755.1-201ENST00000619504 163 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 AC093908.1-201ENST00000623125 8092 ntBASIC2.57□□□□□ -2
LINC01555Q8NAE3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LINC01555Q8NAE3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LINC01555Q8NAE3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LINC01555Q8NAE3 FAM35BP-202ENST00000497389 3337 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.56□□□□□ -2
LINC01555Q8NAE3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
LINC01555Q8NAE3 RNU6-28P-201ENST00000362378 107 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 RNU6-1249P-201ENST00000363237 111 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
LINC01555Q8NAE3 RNU6-878P-201ENST00000384578 110 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 MIR591-201ENST00000385290 95 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.56□□□□□ -2
LINC01555Q8NAE3 RNU6-821P-201ENST00000390995 107 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 HMGB1P17-201ENST00000403495 628 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 MIR320C1-201ENST00000408566 88 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 RNU6-920P-201ENST00000410926 92 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 AC083875.1-201ENST00000419509 405 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 AL365203.2-201ENST00000423444 196 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms