Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 MTND4P35-201ENST00000604257 1375 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 MAPK10-372ENST00000641954 3413 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 RNY1P12-201ENST00000364251 105 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 RNU6-146P-201ENST00000384602 108 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 MIR183-201ENST00000384958 110 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 U3.20-201ENST00000390909 217 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 MTND3P8-201ENST00000412909 339 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 AC127526.1-201ENST00000417526 366 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 TIMM9P1-201ENST00000436122 256 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 IFNA20P-201ENST00000436840 528 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 FTH1P1-201ENST00000437933 532 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 AC092013.1-201ENST00000438795 332 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 snoU13.7-201ENST00000459220 104 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 GMFBP1-201ENST00000467831 427 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 AC021382.1-201ENST00000483523 359 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 AL163973.1-201ENST00000484753 577 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 AC096576.1-201ENST00000489014 359 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 AC108145.1-201ENST00000503770 153 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 PPBPP1-201ENST00000510807 373 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 AC008694.2-201ENST00000517591 306 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 IGKV2D-19-201ENST00000523346 262 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 AP005597.4-201ENST00000526762 229 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 MIR4742-201ENST00000581069 85 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 GLUD1P4-201ENST00000590914 418 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 AC008638.3-201ENST00000603341 463 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 OR6R2P-201ENST00000609216 300 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 AC011460.1-201ENST00000636268 1834 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 ELL2P4-201ENST00000446870 1376 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 Z82217.1-201ENST00000625157 8149 ntBASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A3Q8N4M1 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AC004972.1-201ENST00000623934 2209 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 SNORD35B-201ENST00000363660 87 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 RNA5SP72-201ENST00000364442 117 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 RNA5SP97-201ENST00000365006 84 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 RNA5SP22-201ENST00000365393 109 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 RNU6-996P-201ENST00000365438 107 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 RNU4-20P-201ENST00000365601 151 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 Y_RNA.431-201ENST00000384086 102 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 RNU6-39P-201ENST00000384344 107 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 RN7SKP167-201ENST00000411047 285 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 RPS29P4-201ENST00000414733 161 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 PSMA6P3-201ENST00000428242 164 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 OR4F13P-201ENST00000428478 931 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 ATP5JP1-201ENST00000431631 322 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AL138799.3-201ENST00000438968 350 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 GEMIN8P3-201ENST00000445417 720 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 IFNWP4-201ENST00000453148 294 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AL121877.1-201ENST00000453704 622 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AC133473.1-201ENST00000455173 299 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AC078785.3-201ENST00000476607 425 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 PPIAP15-201ENST00000479662 484 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 HMGB1P21-201ENST00000502313 581 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 TMEM248P1-201ENST00000510579 951 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AC074250.1-201ENST00000511117 192 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 RNU7-143P-201ENST00000516781 65 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 BTF3P12-201ENST00000519620 469 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 OR4P1P-201ENST00000530808 1136 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 YPEL5P3-201ENST00000547227 352 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms