Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.53
NPAS3Q8IXF0 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NPAS3Q8IXF0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
NPAS3Q8IXF0 AC000374.1-201ENST00000434698 1745 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 AL121839.2-201ENST00000565058 6943 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 RNA5SP455-201ENST00000365190 119 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 U8.8-201ENST00000365399 135 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 RNA5SP87-201ENST00000384155 118 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 RNU6-514P-201ENST00000384208 107 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 MIR1182-201ENST00000408363 97 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 FAR2P2-201ENST00000413041 594 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 AC092809.3-201ENST00000415453 231 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 OR2AM1P-201ENST00000422137 422 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 AC073063.1-201ENST00000434352 607 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 RPS11P1-201ENST00000451072 473 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 TRAV32-201ENST00000553993 340 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 AL591926.8-201ENST00000616876 211 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 MIR6810-201ENST00000622701 70 ntBASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
NPAS3Q8IXF0 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 RNU4-84P-201ENST00000364200 139 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 RNVU1-6-201ENST00000364688 164 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 RNU6-701P-201ENST00000384059 107 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 RNY3P4-201ENST00000384428 101 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 AC079809.1-201ENST00000415468 276 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 RPS15AP6-201ENST00000420703 385 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 AC138761.5-201ENST00000433967 325 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 LINC02210-201ENST00000444561 288 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 RPS29P33-201ENST00000456717 146 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 AC133134.1-201ENST00000466800 359 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 AC016065.2-201ENST00000514530 444 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 AL671862.1-201ENST00000515851 349 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 Y_RNA.709-201ENST00000516952 92 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 ERHP1-201ENST00000523006 310 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 GSTP1P1-201ENST00000548078 319 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 FKBP1BP1-201ENST00000553366 325 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 EDDM3DP-201ENST00000554692 434 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 AC073349.3-201ENST00000617616 186 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 SNORD39.4-201ENST00000620099 78 ntBASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS3Q8IXF0 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms