Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 MIR373-201ENST00000362273 69 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 MIR524-201ENST00000385242 87 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 CASP3P1-201ENST00000446037 609 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 AC022493.1-201ENST00000492984 337 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 RPL21P131-201ENST00000497298 483 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 RNU6-1223P-201ENST00000517124 104 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 AC138915.1-201ENST00000565427 1685 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 RPL23AP47-201ENST00000408017 460 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 Z85995.1-201ENST00000415547 335 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 AC008850.1-201ENST00000427546 362 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 HMGB3P10-201ENST00000434734 572 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 AC096571.1-202ENST00000506634 735 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 RNA5SP384-201ENST00000516615 116 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 AL121821.2-201ENST00000556081 394 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 Z96811.1-201ENST00000445880 108 ntBASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 AC008885.2-201ENST00000509506 930 ntBASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 AC008837.2-201ENST00000513076 418 ntBASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 MKKS-204ENST00000639674 192 ntBASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 AC090740.1-201ENST00000623193 2262 ntBASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 ZNF734P-201ENST00000419494 1534 ntBASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 AC135776.4-201ENST00000624300 1904 ntBASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 U8.1-201ENST00000362843 134 ntBASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 OR1L1-202ENST00000373686 1083 ntBASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 AL391646.1-201ENST00000603860 190 ntBASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 AC006338.1-201ENST00000618453 749 ntBASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 AC008427.1-201ENST00000503102 655 ntBASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 AC007375.1-201ENST00000554513 578 ntBASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 AL590099.1-201ENST00000615276 138 ntBASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.81□□□□□ -2.28
VPS13BQ7Z7G8 DDX43P2-201ENST00000604753 1354 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AP000567.1-201ENST00000406413 156 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 MIR1304-201ENST00000408243 91 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AC096632.1-201ENST00000427395 310 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AP002345.1-201ENST00000456493 928 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 FABP5P5-201ENST00000515537 406 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AL109653.1-201ENST00000603091 248 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 MIR7974-201ENST00000615835 79 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 RNA5SP38-201ENST00000410750 119 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 TPMTP3-201ENST00000411928 735 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AC007098.1-201ENST00000420122 367 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AL022400.1-201ENST00000423946 935 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 MORF4L1P7-201ENST00000426038 703 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 MTND5P25-201ENST00000430499 799 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AL445305.1-201ENST00000432577 575 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 RPL21P93-201ENST00000480465 489 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AC233702.1-201ENST00000482905 502 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 MRPL42P6-201ENST00000486397 371 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AC093591.1-201ENST00000491435 481 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 RNA5SP476-201ENST00000516613 103 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 RNU6-37P-201ENST00000362692 107 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 RNU6-11P-201ENST00000364234 107 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 RPS15AP7-201ENST00000439294 405 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 SNRPFP2-201ENST00000440710 251 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 CLIC4P1-201ENST00000453177 535 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AC090821.2-201ENST00000523552 176 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AP004607.1-201ENST00000524456 203 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AC087373.1-201ENST00000524920 491 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AC007275.1-201ENST00000621243 671 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms