Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 TRGVB-201ENST00000453257 471 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 RPL18AP17-201ENST00000455326 198 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 RPL7P18-201ENST00000478965 734 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AP004217.1-201ENST00000480579 346 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 RN7SL636P-201ENST00000497504 294 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AC026407.1-201ENST00000518369 204 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 DUXAP1-201ENST00000556632 463 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AC090888.2-201ENST00000559765 1144 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 MIR1273D-201ENST00000577266 86 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AC099778.2-201ENST00000610904 211 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 U6.101-201ENST00000637707 76 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AC092326.2-201ENST00000624772 1561 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 RNU6-621P-201ENST00000364752 109 ntBASIC3.5□□□□□ -1.85
NPHP3Q7Z494 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 DPH3P2-201ENST00000422618 250 ntBASIC3.5□□□□□ -1.85
NPHP3Q7Z494 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 RPS25P9-201ENST00000435591 252 ntBASIC3.5□□□□□ -1.85
NPHP3Q7Z494 RABEPKP1-201ENST00000440529 1026 ntBASIC3.5□□□□□ -1.85
NPHP3Q7Z494 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 AC098862.1-201ENST00000504991 413 ntBASIC3.5□□□□□ -1.85
NPHP3Q7Z494 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 AL512347.1-201ENST00000566420 503 ntBASIC3.5□□□□□ -1.85
NPHP3Q7Z494 AL354943.1-201ENST00000572103 781 ntBASIC3.5□□□□□ -1.85
NPHP3Q7Z494 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 AC097520.1-201ENST00000624435 385 ntBASIC3.5□□□□□ -1.85
NPHP3Q7Z494 AC079228.1-201ENST00000624774 1049 ntBASIC3.5□□□□□ -1.85
NPHP3Q7Z494 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPHP3Q7Z494 RNA5SP295-201ENST00000362655 121 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 TIMM9P2-201ENST00000419324 266 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 NEK4P1-201ENST00000433383 879 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 MTND4LP10-201ENST00000435146 291 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 MTND2P20-201ENST00000440805 661 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 MTCYBP11-201ENST00000447254 1109 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 AL445669.2-201ENST00000454425 421 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 AC092754.2-201ENST00000463506 460 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 AC096751.1-202ENST00000502691 1067 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 MLLT10P2-201ENST00000506434 249 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 RNU6-583P-201ENST00000516012 92 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 AC087465.1-201ENST00000560574 245 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 AC009220.3-201ENST00000604318 586 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 AP001330.4-201ENST00000604350 154 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 AC010738.1-201ENST00000604970 987 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 AL360181.4-201ENST00000621752 134 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 AC095031.1-201ENST00000623685 672 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 MIR1322-201ENST00000638013 71 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 AL353746.1-201ENST00000566293 6881 ntBASIC3.49□□□□□ -1.85
NPHP3Q7Z494 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
NPHP3Q7Z494 MTCO1P9-201ENST00000505577 1534 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NPHP3Q7Z494 SNORD114-30-201ENST00000364448 72 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHP3Q7Z494 RNU6-1122P-201ENST00000384449 107 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 MIR181A2-201ENST00000384863 110 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 TAS2R15P-201ENST00000390674 928 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 RPL23AP29-201ENST00000397284 453 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AC099677.1-201ENST00000420575 175 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms