Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MIR19A-201ENST00000384878 82 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 MIR325-201ENST00000385260 98 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 U8.14-201ENST00000390843 143 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 RAP1BP1-201ENST00000412709 553 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 AC126124.2-201ENST00000413542 321 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 Z99755.1-201ENST00000414048 380 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 AL451054.2-201ENST00000420896 202 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 USP9YP26-201ENST00000421008 661 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 ZNF863P-201ENST00000426746 417 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 BX890604.2-201ENST00000427883 474 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 AC007919.1-201ENST00000429380 217 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 YME1L1P1-201ENST00000429435 297 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 RPL22P17-201ENST00000438729 315 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 PIGFP3-201ENST00000441918 722 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 ATP5C1P1-201ENST00000441945 895 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 MTND5P2-201ENST00000442927 1142 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 GAPDHP27-201ENST00000447427 1020 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 AC097262.1-201ENST00000452559 548 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 snoU13.28-201ENST00000459235 104 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 RPL7P49-201ENST00000471402 708 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 MTND1P22-201ENST00000510572 951 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 TTC39CP1-201ENST00000512513 755 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 MTND5P13-201ENST00000513046 1079 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 MIR4307-201ENST00000582802 84 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 AL606834.2-201ENST00000602954 668 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 NUTF2P8-201ENST00000604593 363 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 AC099654.7-201ENST00000635788 2127 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 RNU6-501P-201ENST00000364072 100 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 RNA5SP354-201ENST00000391247 136 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 CCNG1P1-201ENST00000406783 885 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 RNU2-33P-201ENST00000410344 192 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 ATG3P1-201ENST00000419507 911 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AC005005.2-201ENST00000420779 380 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AC109583.1-201ENST00000432156 268 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 FTH1P1-201ENST00000437933 532 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AC008264.1-201ENST00000447612 367 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AL122001.1-201ENST00000457027 370 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 HMGN1P18-201ENST00000457642 277 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AC055855.1-201ENST00000489563 579 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AC116347.2-201ENST00000514912 523 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 SNORA64.4-201ENST00000516632 81 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 SNORA31.21-201ENST00000517180 77 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AC068657.1-201ENST00000520807 306 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AC104027.1-201ENST00000521887 300 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 DEFB108A-201ENST00000530110 222 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AC008751.2-201ENST00000597885 980 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 BCRP9-201ENST00000605312 388 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AL136363.1-201ENST00000605349 337 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AC099778.2-201ENST00000610904 211 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AC079416.3-201ENST00000624479 549 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AC017071.1-201ENST00000564407 2204 ntBASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
NHLRC1Q6VVB1 AC092435.3-201ENST00000565538 3654 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AC008669.1-201ENST00000565823 2178 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 MIR148B-201ENST00000362252 99 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 SNORA63.1-201ENST00000362493 131 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 SNORD56.3-201ENST00000363507 71 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms