Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 Y_RNA.188-201ENST00000363952 111 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 Y_RNA.428-201ENST00000384078 102 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 SNORD3H-201ENST00000384486 214 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 MT-TG-201ENST00000387429 68 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 U3.30-201ENST00000391308 210 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AL590704.1-201ENST00000402856 794 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 HSPE1P8-201ENST00000406997 288 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNA5SP113-201ENST00000410486 84 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 Y_RNA.618-201ENST00000410949 107 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 RN7SKP58-201ENST00000411010 305 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC243428.1-201ENST00000421099 264 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 DPH3P2-201ENST00000422618 250 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AL591212.2-201ENST00000433923 257 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC092324.1-201ENST00000468671 324 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC007686.1-201ENST00000488511 463 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 RN7SL283P-201ENST00000489055 303 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 RPS27AP13-201ENST00000498403 237 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 SNORD116-26-201ENST00000516006 96 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 SNORD116.3-201ENST00000517176 78 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AP001880.2-201ENST00000538233 448 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC092447.9-201ENST00000603395 144 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 NUTF2P8-201ENST00000604593 363 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 SDR42E1P2-201ENST00000614861 481 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC067931.1-201ENST00000624190 671 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AL672167.1-205ENST00000641112 3080 ntBASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
HLA-DQA1Q5Y7H0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC005592.1-201ENST00000566527 1640 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNU6-266P-201ENST00000364225 107 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNU6-371P-201ENST00000364283 108 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 Y_RNA.389-201ENST00000383924 113 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNU6-784P-201ENST00000384330 106 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 Y_RNA.574-201ENST00000384766 95 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 RPL21P90-201ENST00000415692 466 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 BX842559.1-201ENST00000419615 532 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC093151.1-201ENST00000427711 313 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC097713.2-201ENST00000430199 356 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 RPL23AP50-201ENST00000434149 455 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 CKS1BP5-201ENST00000434172 273 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC004938.1-201ENST00000438468 308 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 CEACAMP6-201ENST00000452007 574 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 HMGB3P30-201ENST00000457863 606 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 snoU13.3-201ENST00000459441 104 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 U8.20-201ENST00000459445 131 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC110794.1-201ENST00000505816 425 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 HMGB3P16-201ENST00000508037 287 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 RN7SKP276-201ENST00000516242 268 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNU6-1271P-201ENST00000517049 105 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 RN7SKP258-201ENST00000517151 304 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 CDH12P4-201ENST00000517835 295 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 CDH12P3-201ENST00000517935 295 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 CDH12P1-201ENST00000518435 295 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 AP006245.2-201ENST00000522004 300 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC091042.1-201ENST00000579213 173 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 MIR4480-201ENST00000582492 71 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 MIR15A-201ENST00000607334 83 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC100827.5-201ENST00000615883 426 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC015914.2-201ENST00000618167 288 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC091812.1-201ENST00000432235 1948 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms