Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RPL7L1P8-201ENST00000469911 741 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 AC078785.3-201ENST00000476607 425 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 RNU6-1281P-201ENST00000516223 105 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 SNORA40.12-201ENST00000516329 111 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 CBX3P5-201ENST00000552017 521 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 AC093227.2-201ENST00000589357 285 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 AC013553.2-201ENST00000604244 589 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 AC023043.4-201ENST00000612081 449 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 AP001486.3-201ENST00000615334 372 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 AL354950.2-201ENST00000617939 290 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 MIR7703-201ENST00000620784 77 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 MIR7702-201ENST00000621931 59 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 MIR3688-2-201ENST00000636963 87 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 MTND5P42-201ENST00000637720 498 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 OTUD4P1-201ENST00000237841 3067 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AC016769.2-201ENST00000414815 475 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 Z85995.1-201ENST00000415547 335 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AL109913.1-201ENST00000421173 514 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 UBE2D3P2-201ENST00000424409 445 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 MTND4P25-201ENST00000441039 533 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AC016691.1-201ENST00000441321 413 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 PHBP16-201ENST00000446318 950 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 RPL23AP81-201ENST00000455252 467 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 RNU6-420P-201ENST00000458780 107 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 RNU7-170P-201ENST00000459303 61 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 RPL37P6-201ENST00000460682 294 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AC041039.1-201ENST00000485656 536 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 RN7SL810P-201ENST00000493031 276 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AC093824.1-201ENST00000508796 343 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 RNA5SP503-201ENST00000517047 117 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 RN7SKP92-201ENST00000517266 244 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AC034105.3-201ENST00000565294 442 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AL162413.1-201ENST00000603198 110 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 RBM11P1-201ENST00000604951 799 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AC019193.2-201ENST00000610012 634 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AC007014.2-201ENST00000615581 479 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.93□□□□□ -1.78
RNF220Q5VTB9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF220Q5VTB9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 MAPK10-372ENST00000641954 3413 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 RNU6-288P-201ENST00000363690 104 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 RNA5SP505-201ENST00000364748 108 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 SNORD115-7-201ENST00000365306 82 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 RNU6-996P-201ENST00000365438 107 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 RNU6-741P-201ENST00000383889 107 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 RNU6-190P-201ENST00000384154 102 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 RNA5SP332-201ENST00000391063 115 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 HSPE1P8-201ENST00000406997 288 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 BTF3L4P3-201ENST00000418879 476 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AL157831.1-201ENST00000426134 473 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 NDUFB4P6-201ENST00000436819 366 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 RPL23AP52-201ENST00000439311 478 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 MTND1P18-201ENST00000448191 573 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms