Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC019176.1-201ENST00000518519 225 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 AC105245.1-201ENST00000581934 244 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 CBX3P2-202ENST00000583365 535 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 HSPE1P14-201ENST00000605812 302 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 STMN1P1-201ENST00000617809 440 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 AL359851.1-201ENST00000569460 4997 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 PSMA2P3-201ENST00000429685 675 ntBASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 AC023424.2-201ENST00000493479 777 ntBASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 RPL37P25-201ENST00000507308 276 ntBASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 MTCO1P47-201ENST00000523889 1271 ntBASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 AC114973.1-201ENST00000429057 632 ntBASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 AC112191.3-201ENST00000604371 277 ntBASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 HSPE1P1-201ENST00000421494 318 ntBASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 MIR5000-201ENST00000577717 103 ntBASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 AC138915.1-201ENST00000565427 1685 ntBASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 AC244033.1-201ENST00000426826 870 ntBASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 AC092902.1-201ENST00000486999 259 ntBASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 AC087808.1-201ENST00000520501 361 ntBASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 AC116618.1-201ENST00000634617 774 ntBASIC0.87□□□□□ -2.27
VPS13DQ5THJ4 MTND4P34-201ENST00000572715 1371 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 OR4G11P-202ENST00000642116 1414 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 AL161722.3-201ENST00000605789 2983 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 RNU6-997P-201ENST00000384725 107 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 AC008850.1-201ENST00000427546 362 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 HMGN1P33-201ENST00000432945 451 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 AC108059.3-201ENST00000456388 214 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 AL121821.2-201ENST00000556081 394 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 AC010735.1-201ENST00000567305 1026 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 AC121333.1-201ENST00000567488 2709 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 FO393413.1-201ENST00000402892 195 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 HMGB1P49-201ENST00000418882 569 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 AC234781.2-201ENST00000426370 994 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 HMGB3P21-201ENST00000452483 547 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 RN7SKP265-201ENST00000516448 223 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 RPS15AP11-201ENST00000594193 385 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 AL589935.2-201ENST00000616471 1231 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 AL357134.1-201ENST00000445848 426 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 TPRKBP1-201ENST00000456243 481 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 KLRA1P-201ENST00000503499 986 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 AC125611.2-201ENST00000551907 647 ntBASIC0.86□□□□□ -2.27
VPS13DQ5THJ4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 SGO1P2-201ENST00000429458 1589 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 HMGB1P5-201ENST00000255320 642 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 Y_RNA.30-201ENST00000362572 97 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 TPMTP3-201ENST00000411928 735 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 AL136380.1-201ENST00000447970 162 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 SNORD59.2-201ENST00000516873 68 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 TRAV28-201ENST00000557548 323 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 MIR7973-1-201ENST00000614683 76 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 RNA5SP139-201ENST00000364340 117 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 AP000567.1-201ENST00000406413 156 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 HAUS1P1-201ENST00000505275 832 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 AC021146.8-201ENST00000507455 733 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 RNA5SP384-201ENST00000516615 116 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 RNU6-711P-201ENST00000517255 106 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 AC008962.1-201ENST00000605729 304 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 THAP5P1-201ENST00000439089 262 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 FO393415.2-201ENST00000480085 343 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 MIR7974-201ENST00000615835 79 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 AP000676.4-201ENST00000624659 623 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 RNA5SP189-201ENST00000364920 115 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 AL355497.1-201ENST00000406262 551 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 RPL21P104-201ENST00000464143 478 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 AC008837.2-201ENST00000513076 418 ntBASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.85□□□□□ -2.27
VPS13DQ5THJ4 AL136520.1-201ENST00000600311 1322 ntBASIC0.84□□□□□ -2.27
VPS13DQ5THJ4 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
VPS13DQ5THJ4 AL357078.2-201ENST00000416486 427 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms