Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 AC027228.2-201ENST00000567141 2154 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 AC083843.3-201ENST00000623679 2186 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 ZNF137P-201ENST00000456718 1920 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 RHOT1P2-201ENST00000366423 333 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 Y_RNA.424-201ENST00000384063 103 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 RNU6-301P-201ENST00000384277 107 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 RNU11-4P-201ENST00000391149 133 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 ENSAP1-201ENST00000392855 326 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 RPL21P109-201ENST00000422213 475 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 AL645568.3-201ENST00000433683 316 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 MTCO3P45-201ENST00000443036 613 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 RN7SL188P-201ENST00000469842 285 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 RNU6-408P-201ENST00000515910 100 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 SCARNA16.2-201ENST00000516520 172 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 AC011494.1-201ENST00000596454 237 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 AL359547.2-201ENST00000615810 418 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 AL138825.1-201ENST00000618587 192 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 AC110801.1-201ENST00000623590 212 ntBASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL13A1Q5TAT6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AC133552.1-201ENST00000569988 4007 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AC027287.1-201ENST00000553115 1453 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 SNORA71.2-201ENST00000364941 134 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 RNU6-715P-201ENST00000365204 103 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 RNU6-26P-201ENST00000383985 107 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AL357515.1-201ENST00000402967 542 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 MIR548I3-201ENST00000408378 149 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 MIR548I1-201ENST00000408810 149 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 MRPS18BP2-201ENST00000434310 759 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 FABP5P13-201ENST00000452144 328 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AC112492.4-201ENST00000456549 352 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AC117503.1-201ENST00000472241 394 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 RN7SKP40-201ENST00000517211 242 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AC091516.1-201ENST00000549191 703 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AC105129.1-201ENST00000560250 297 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 RPL23AP84-201ENST00000571193 464 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AC006254.3-201ENST00000603353 884 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 Z98751.3-201ENST00000604447 521 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AL161423.1-201ENST00000613700 262 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 TUG1_2.1-201ENST00000614234 87 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AL022401.1-201ENST00000619498 108 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 AC074029.4-201ENST00000624796 1859 ntBASIC5.34□□□□□ -1.55
COL13A1Q5TAT6 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL13A1Q5TAT6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
COL13A1Q5TAT6 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
COL13A1Q5TAT6 AL161912.2-201ENST00000565707 3007 ntBASIC5.33□□□□□ -1.56
COL13A1Q5TAT6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.33□□□□□ -1.56
COL13A1Q5TAT6 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL13A1Q5TAT6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL13A1Q5TAT6 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
COL13A1Q5TAT6 Y_RNA.2-201ENST00000362330 96 ntBASIC5.33□□□□□ -1.56
COL13A1Q5TAT6 RNU6-266P-201ENST00000364225 107 ntBASIC5.33□□□□□ -1.56
COL13A1Q5TAT6 Y_RNA.288-201ENST00000364854 92 ntBASIC5.33□□□□□ -1.56
COL13A1Q5TAT6 RPL21P65-201ENST00000406094 466 ntBASIC5.33□□□□□ -1.56
COL13A1Q5TAT6 RN7SKP267-201ENST00000410381 285 ntBASIC5.33□□□□□ -1.56
COL13A1Q5TAT6 RNU6-55P-201ENST00000411092 107 ntBASIC5.33□□□□□ -1.56
COL13A1Q5TAT6 RNA5SP111-201ENST00000411386 101 ntBASIC5.33□□□□□ -1.56
COL13A1Q5TAT6 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.33□□□□□ -1.56
COL13A1Q5TAT6 VTI1BP4-201ENST00000427516 527 ntBASIC5.33□□□□□ -1.56
COL13A1Q5TAT6 SUMO1P3-201ENST00000439961 304 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms