Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.82□□□□□ -1.64
SNAP47Q5SQN1 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNAP47Q5SQN1 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNAP47Q5SQN1 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.82□□□□□ -1.64
SNAP47Q5SQN1 SCN1A-220ENST00000641603 12506 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 RNU6-890P-201ENST00000384121 107 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 RNU6-214P-201ENST00000384130 107 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 SNORA77-201ENST00000408716 125 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 HIGD1AP11-201ENST00000438361 280 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 H2AFZP6-201ENST00000444403 394 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 RPS29P33-201ENST00000456717 146 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 AC096745.1-201ENST00000509945 370 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 PTP4A1P4-201ENST00000512479 322 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 RNU6-1046P-201ENST00000516538 107 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 RN7SKP295-201ENST00000517264 153 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 AC022968.1-201ENST00000567372 442 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 MIR3667-201ENST00000581025 74 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 AC100830.2-201ENST00000581636 240 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 uc_338.18-201ENST00000615451 175 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 AC019206.1-201ENST00000621938 425 ntBASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNAP47Q5SQN1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 AL049641.1-201ENST00000441055 1948 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 Y_RNA.5-201ENST00000362334 102 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 Y_RNA.144-201ENST00000363521 113 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 Y_RNA.148-201ENST00000363557 117 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 MIR578-201ENST00000384828 96 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 MIR514A1-201ENST00000385133 98 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 RNU6-1050P-201ENST00000410388 107 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 AC113618.1-201ENST00000416747 285 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 AL451062.2-201ENST00000427515 271 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 AL035666.1-201ENST00000446195 348 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 CYCSP34-201ENST00000458172 304 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 RNU7-138P-201ENST00000459479 64 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 AC087588.1-201ENST00000462203 316 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 AL591473.1-201ENST00000464297 313 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 AC092451.1-201ENST00000480211 153 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 APOOP4-201ENST00000513530 597 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 Y_RNA.670-201ENST00000516255 105 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 AC012339.2-201ENST00000523996 453 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 MIR548AC-201ENST00000585049 88 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 SNORD91B-202ENST00000608459 222 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 MTND5P16-201ENST00000460269 1703 ntBASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.8□□□□□ -1.64
SNAP47Q5SQN1 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNAP47Q5SQN1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SNAP47Q5SQN1 LINC01109-201ENST00000603837 3081 ntBASIC4.79□□□□□ -1.64
SNAP47Q5SQN1 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNAP47Q5SQN1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.79□□□□□ -1.64
SNAP47Q5SQN1 OR51H2P-202ENST00000641424 3046 ntBASIC4.79□□□□□ -1.64
SNAP47Q5SQN1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNAP47Q5SQN1 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.79□□□□□ -1.64
SNAP47Q5SQN1 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNAP47Q5SQN1 OR4G2P-202ENST00000641004 1759 ntBASIC4.79□□□□□ -1.64
SNAP47Q5SQN1 UBE2L2-201ENST00000254302 429 ntBASIC4.79□□□□□ -1.64
SNAP47Q5SQN1 AC138393.1-203ENST00000327086 343 ntBASIC4.79□□□□□ -1.64
SNAP47Q5SQN1 SNORD62.1-201ENST00000362541 86 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms