Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 VTI1BP4-201ENST00000427516 527 ntBASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 ISCUP1-201ENST00000454451 448 ntBASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 MIR5701-3-201ENST00000578890 82 ntBASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 MIR5701-1-201ENST00000585138 82 ntBASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 AC006254.2-201ENST00000603259 279 ntBASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 AL160281.1-201ENST00000605307 311 ntBASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 MIR5701-2-201ENST00000615634 82 ntBASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 AC006133.1-201ENST00000617106 264 ntBASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 AC073869.8-201ENST00000641806 335 ntBASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 AC018628.1-201ENST00000624147 3819 ntBASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
RSPO4Q2I0M5 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 RNU6-898P-201ENST00000365627 104 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 Y_RNA.435-201ENST00000384095 112 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 RNU6-102P-201ENST00000384485 104 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 Y_RNA.533-201ENST00000384596 114 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 RNU6-257P-201ENST00000410238 98 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 AL030996.1-201ENST00000411430 235 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 EI24P1-201ENST00000416584 867 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 AF186996.5-201ENST00000418098 904 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 AC011276.1-201ENST00000469688 323 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 AC007016.1-201ENST00000512110 244 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 RNU6-496P-201ENST00000516145 99 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 MIR2116-201ENST00000517221 80 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 AL158827.2-201ENST00000602494 330 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 AC005191.1-201ENST00000603950 358 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 AL121917.1-203ENST00000605534 577 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 AL691447.3-201ENST00000635020 330 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 U6.92-201ENST00000636464 89 ntBASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.93□□□□□ -1.62
RSPO4Q2I0M5 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 AP000756.2-201ENST00000624168 2567 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 SNX18P3-202ENST00000565670 1750 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 AL590240.1-201ENST00000334118 313 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 RNU4-44P-201ENST00000363050 141 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 Y_RNA.127-201ENST00000363386 109 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 RNU6-946P-201ENST00000383878 107 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 RNU6-700P-201ENST00000391043 107 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 RNU5E-9P-201ENST00000411164 104 ntBASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.92□□□□□ -1.62
RSPO4Q2I0M5 AC234781.4-201ENST00000419384 244 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms