Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.76□□□□□ -1.65
SSRP1Q08945 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.76□□□□□ -1.65
SSRP1Q08945 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.76□□□□□ -1.65
SSRP1Q08945 RN7SL604P-201ENST00000492589 296 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 RPL29P14-201ENST00000495837 428 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.76□□□□□ -1.65
SSRP1Q08945 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
SSRP1Q08945 AC091885.1-201ENST00000506658 268 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 KLHL2P1-201ENST00000508691 521 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 PSMA2P1-201ENST00000526365 646 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.76□□□□□ -1.65
SSRP1Q08945 AC023050.3-201ENST00000541142 333 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.76□□□□□ -1.65
SSRP1Q08945 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.76□□□□□ -1.65
SSRP1Q08945 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.76□□□□□ -1.65
SSRP1Q08945 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.76□□□□□ -1.65
SSRP1Q08945 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.76□□□□□ -1.65
SSRP1Q08945 AC010133.1-201ENST00000615809 842 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 MIR6758-201ENST00000620653 63 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 AC007998.5-201ENST00000622938 237 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 MTND4P14-201ENST00000435799 1354 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSRP1Q08945 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSRP1Q08945 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.75□□□□□ -1.65
SSRP1Q08945 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.75□□□□□ -1.65
SSRP1Q08945 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.75□□□□□ -1.65
SSRP1Q08945 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.75□□□□□ -1.65
SSRP1Q08945 Y_RNA.61-201ENST00000362835 102 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 RNU6-1287P-201ENST00000362914 107 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 SNORD35B-201ENST00000363660 87 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 RNU6-173P-201ENST00000364215 104 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 RNU6-1060P-201ENST00000384664 107 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.75□□□□□ -1.65
SSRP1Q08945 EI24P1-201ENST00000416584 867 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.75□□□□□ -1.65
SSRP1Q08945 DUTP6-201ENST00000425573 462 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 MTND4P28-201ENST00000426217 387 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.75□□□□□ -1.65
SSRP1Q08945 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.75□□□□□ -1.65
SSRP1Q08945 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.75□□□□□ -1.65
SSRP1Q08945 HMGN2P26-201ENST00000463169 339 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 AC010285.1-201ENST00000470580 392 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 MLLT10P2-201ENST00000506434 249 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 AC104806.1-201ENST00000508720 308 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.75□□□□□ -1.65
SSRP1Q08945 RNA5SP154-201ENST00000516193 111 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 SNORA31.9-201ENST00000516429 84 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.75□□□□□ -1.65
SSRP1Q08945 AC022882.1-201ENST00000532142 501 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.75□□□□□ -1.65
SSRP1Q08945 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.75□□□□□ -1.65
SSRP1Q08945 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.75□□□□□ -1.65
SSRP1Q08945 FAM60BP-201ENST00000578364 658 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 RN7SL600P-201ENST00000581811 299 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.75□□□□□ -1.65
SSRP1Q08945 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.75□□□□□ -1.65
SSRP1Q08945 AC104662.1-201ENST00000604448 511 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 AC012603.1-201ENST00000606424 528 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 RNU6-89P-201ENST00000606519 100 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 MIR7151-201ENST00000617477 60 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 AC090617.10-201ENST00000624308 134 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.75□□□□□ -1.65
SSRP1Q08945 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSRP1Q08945 AC103710.2-202ENST00000641454 2853 ntBASIC4.75□□□□□ -1.65
SSRP1Q08945 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SSRP1Q08945 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSRP1Q08945 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSRP1Q08945 Y_RNA.11-201ENST00000362375 109 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 Y_RNA.166-201ENST00000363730 102 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 RNU6-694P-201ENST00000364071 147 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 RNU4-66P-201ENST00000365199 138 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 AL356967.1-201ENST00000406305 431 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 AC108032.1-201ENST00000416706 207 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 CALM2P2-201ENST00000428512 440 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.74□□□□□ -1.65
SSRP1Q08945 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.74□□□□□ -1.65
SSRP1Q08945 RPL7P12-201ENST00000446719 750 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 HMGN2P21-201ENST00000447764 270 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 RNU7-180P-201ENST00000459240 63 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 RPL21P99-201ENST00000480369 423 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 AC026979.1-201ENST00000492525 396 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 HMGB1P22-201ENST00000505315 124 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 AC098591.2-201ENST00000510152 315 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 GMPSP1-201ENST00000514075 579 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 IGKV2-38-201ENST00000517443 247 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 AP006587.4-201ENST00000526053 529 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 RANP3-201ENST00000530970 276 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 AC243972.3-201ENST00000539655 198 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
SSRP1Q08945 AC078814.3-201ENST00000553036 491 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 AC025627.2-201ENST00000576220 160 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SSRP1Q08945 MIR5684-201ENST00000585074 65 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 MIR4424-201ENST00000585257 86 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 AC083809.1-201ENST00000615051 472 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 AL136221.1-201ENST00000621449 509 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 AC022140.2-201ENST00000623500 188 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 MIR6830-201ENST00000636015 70 ntBASIC4.74□□□□□ -1.65
SSRP1Q08945 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms