Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 MTND3P22-201ENST00000510932 243 ntBASIC3.52□□□□□ -1.85
LTBQ06643 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.52□□□□□ -1.85
LTBQ06643 RNU6-835P-201ENST00000516974 104 ntBASIC3.52□□□□□ -1.85
LTBQ06643 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.52□□□□□ -1.85
LTBQ06643 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LTBQ06643 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LTBQ06643 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.52□□□□□ -1.85
LTBQ06643 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.52□□□□□ -1.85
LTBQ06643 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.52□□□□□ -1.85
LTBQ06643 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.52□□□□□ -1.85
LTBQ06643 AC005261.5-201ENST00000596280 355 ntBASIC3.52□□□□□ -1.85
LTBQ06643 NRBF2P5-201ENST00000603087 788 ntBASIC3.52□□□□□ -1.85
LTBQ06643 BNIP3P10-201ENST00000605360 577 ntBASIC3.52□□□□□ -1.85
LTBQ06643 YWHAEP7-203ENST00000622054 312 ntBASIC3.52□□□□□ -1.85
LTBQ06643 AC009161.2-201ENST00000624626 138 ntBASIC3.52□□□□□ -1.85
LTBQ06643 CR381572.1-201ENST00000625098 102 ntBASIC3.52□□□□□ -1.85
LTBQ06643 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.52□□□□□ -1.85
LTBQ06643 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.52□□□□□ -1.85
LTBQ06643 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LTBQ06643 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.52□□□□□ -1.85
LTBQ06643 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.52□□□□□ -1.85
LTBQ06643 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LTBQ06643 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
LTBQ06643 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.52□□□□□ -1.85
LTBQ06643 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LTBQ06643 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LTBQ06643 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
LTBQ06643 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.51□□□□□ -1.85
LTBQ06643 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
LTBQ06643 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.51□□□□□ -1.85
LTBQ06643 ZNF285B-201ENST00000561698 1767 ntBASIC3.51□□□□□ -1.85
LTBQ06643 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.51□□□□□ -1.85
LTBQ06643 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LTBQ06643 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LTBQ06643 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LTBQ06643 Y_RNA.509-201ENST00000384506 99 ntBASIC3.51□□□□□ -1.85
LTBQ06643 RPL23AP48-201ENST00000406913 488 ntBASIC3.51□□□□□ -1.85
LTBQ06643 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.51□□□□□ -1.85
LTBQ06643 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.51□□□□□ -1.85
LTBQ06643 AC012065.2-201ENST00000421295 375 ntBASIC3.51□□□□□ -1.85
LTBQ06643 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.51□□□□□ -1.85
LTBQ06643 RPL23AP30-201ENST00000432419 501 ntBASIC3.51□□□□□ -1.85
LTBQ06643 PRDX3P3-201ENST00000447765 522 ntBASIC3.51□□□□□ -1.85
LTBQ06643 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.51□□□□□ -1.85
LTBQ06643 AL645939.1-201ENST00000453429 797 ntBASIC3.51□□□□□ -1.85
LTBQ06643 AC007967.1-201ENST00000455422 1159 ntBASIC3.51□□□□□ -1.85
LTBQ06643 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.51□□□□□ -1.85
LTBQ06643 AC083798.1-201ENST00000472671 131 ntBASIC3.51□□□□□ -1.85
LTBQ06643 RPL21P103-201ENST00000479921 488 ntBASIC3.51□□□□□ -1.85
LTBQ06643 AC055855.1-201ENST00000489563 579 ntBASIC3.51□□□□□ -1.85
LTBQ06643 AL139099.1-201ENST00000497398 403 ntBASIC3.51□□□□□ -1.85
LTBQ06643 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.51□□□□□ -1.85
LTBQ06643 AC016065.2-201ENST00000514530 444 ntBASIC3.51□□□□□ -1.85
LTBQ06643 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.51□□□□□ -1.85
LTBQ06643 AC093853.1-201ENST00000515689 483 ntBASIC3.51□□□□□ -1.85
LTBQ06643 RNU1-103P-201ENST00000516502 125 ntBASIC3.51□□□□□ -1.85
LTBQ06643 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.51□□□□□ -1.85
LTBQ06643 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.51□□□□□ -1.85
LTBQ06643 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.51□□□□□ -1.85
LTBQ06643 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.51□□□□□ -1.85
LTBQ06643 AC090877.1-201ENST00000561418 344 ntBASIC3.51□□□□□ -1.85
LTBQ06643 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LTBQ06643 AC087045.1-201ENST00000605856 382 ntBASIC3.51□□□□□ -1.85
LTBQ06643 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.51□□□□□ -1.85
LTBQ06643 AC010133.1-201ENST00000615809 842 ntBASIC3.51□□□□□ -1.85
LTBQ06643 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LTBQ06643 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LTBQ06643 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LTBQ06643 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LTBQ06643 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LTBQ06643 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
LTBQ06643 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LTBQ06643 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.5□□□□□ -1.85
LTBQ06643 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LTBQ06643 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LTBQ06643 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
LTBQ06643 Y_RNA.234-201ENST00000364409 97 ntBASIC3.5□□□□□ -1.85
LTBQ06643 SNORD82-201ENST00000365530 70 ntBASIC3.5□□□□□ -1.85
LTBQ06643 RNU6-878P-201ENST00000384578 110 ntBASIC3.5□□□□□ -1.85
LTBQ06643 RNU6-1158P-201ENST00000391167 107 ntBASIC3.5□□□□□ -1.85
LTBQ06643 HMGN2P8-201ENST00000391458 268 ntBASIC3.5□□□□□ -1.85
LTBQ06643 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LTBQ06643 OR9R1P-201ENST00000412200 877 ntBASIC3.5□□□□□ -1.85
LTBQ06643 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.5□□□□□ -1.85
LTBQ06643 RPS15AP12-201ENST00000419498 388 ntBASIC3.5□□□□□ -1.85
LTBQ06643 SNRPEP10-201ENST00000420249 274 ntBASIC3.5□□□□□ -1.85
LTBQ06643 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.5□□□□□ -1.85
LTBQ06643 AC119618.1-201ENST00000434191 222 ntBASIC3.5□□□□□ -1.85
LTBQ06643 RPL7P28-201ENST00000437739 740 ntBASIC3.5□□□□□ -1.85
LTBQ06643 SNRPGP6-201ENST00000451124 220 ntBASIC3.5□□□□□ -1.85
LTBQ06643 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.5□□□□□ -1.85
LTBQ06643 RPS20P20-201ENST00000460498 340 ntBASIC3.5□□□□□ -1.85
LTBQ06643 RN7SL93P-201ENST00000463035 293 ntBASIC3.5□□□□□ -1.85
LTBQ06643 AC008481.1-201ENST00000463278 396 ntBASIC3.5□□□□□ -1.85
LTBQ06643 S100A11P1-201ENST00000477525 312 ntBASIC3.5□□□□□ -1.85
LTBQ06643 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.5□□□□□ -1.85
LTBQ06643 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.5□□□□□ -1.85
LTBQ06643 RPL23AP94-201ENST00000512518 302 ntBASIC3.5□□□□□ -1.85
LTBQ06643 AC090572.1-201ENST00000519251 160 ntBASIC3.5□□□□□ -1.85
LTBQ06643 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms