Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.54□□□□□ -1.68
YBX1P67809 AC008521.1-201ENST00000587471 187 ntBASIC4.54□□□□□ -1.68
YBX1P67809 AL020997.2-201ENST00000602607 184 ntBASIC4.54□□□□□ -1.68
YBX1P67809 AC092447.9-201ENST00000603395 144 ntBASIC4.54□□□□□ -1.68
YBX1P67809 AC138627.2-201ENST00000624202 601 ntBASIC4.54□□□□□ -1.68
YBX1P67809 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.54□□□□□ -1.68
YBX1P67809 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
YBX1P67809 Z95331.1-201ENST00000623075 23112 ntBASIC4.54□□□□□ -1.68
YBX1P67809 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.54□□□□□ -1.68
YBX1P67809 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
YBX1P67809 EXOC5P1-201ENST00000510543 1969 ntBASIC4.54□□□□□ -1.68
YBX1P67809 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.54□□□□□ -1.68
YBX1P67809 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
YBX1P67809 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
YBX1P67809 AC083843.3-201ENST00000623679 2186 ntBASIC4.54□□□□□ -1.68
YBX1P67809 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
YBX1P67809 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.53□□□□□ -1.68
YBX1P67809 SDAD1P1-202ENST00000524156 2051 ntBASIC4.53□□□□□ -1.68
YBX1P67809 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
YBX1P67809 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.53□□□□□ -1.68
YBX1P67809 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
YBX1P67809 DDX18P3-201ENST00000404856 2007 ntBASIC4.53□□□□□ -1.68
YBX1P67809 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
YBX1P67809 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.53□□□□□ -1.68
YBX1P67809 AC091812.1-201ENST00000432235 1948 ntBASIC4.53□□□□□ -1.68
YBX1P67809 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
YBX1P67809 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
YBX1P67809 RNU6-128P-201ENST00000383976 107 ntBASIC4.53□□□□□ -1.68
YBX1P67809 AL080315.1-201ENST00000406055 466 ntBASIC4.53□□□□□ -1.68
YBX1P67809 RN7SKP27-201ENST00000410684 333 ntBASIC4.53□□□□□ -1.68
YBX1P67809 RN7SKP106-201ENST00000410832 272 ntBASIC4.53□□□□□ -1.68
YBX1P67809 EIF4EP1-201ENST00000422311 642 ntBASIC4.53□□□□□ -1.68
YBX1P67809 RPL23AP50-201ENST00000434149 455 ntBASIC4.53□□□□□ -1.68
YBX1P67809 RPL21P112-201ENST00000434403 463 ntBASIC4.53□□□□□ -1.68
YBX1P67809 HIGD1AP11-201ENST00000438361 280 ntBASIC4.53□□□□□ -1.68
YBX1P67809 MRPL48P1-201ENST00000445390 636 ntBASIC4.53□□□□□ -1.68
YBX1P67809 RPS24P6-201ENST00000452670 400 ntBASIC4.53□□□□□ -1.68
YBX1P67809 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.53□□□□□ -1.68
YBX1P67809 HMGB3P30-201ENST00000457863 606 ntBASIC4.53□□□□□ -1.68
YBX1P67809 AC103987.1-201ENST00000473394 348 ntBASIC4.53□□□□□ -1.68
YBX1P67809 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.53□□□□□ -1.68
YBX1P67809 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.53□□□□□ -1.68
YBX1P67809 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.53□□□□□ -1.68
YBX1P67809 RNU6-1143P-201ENST00000516125 104 ntBASIC4.53□□□□□ -1.68
YBX1P67809 RNY3P15-201ENST00000516297 97 ntBASIC4.53□□□□□ -1.68
YBX1P67809 IGLVIV-53-201ENST00000520107 367 ntBASIC4.53□□□□□ -1.68
YBX1P67809 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
YBX1P67809 AC107918.3-201ENST00000533272 382 ntBASIC4.53□□□□□ -1.68
YBX1P67809 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
YBX1P67809 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.53□□□□□ -1.68
YBX1P67809 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.53□□□□□ -1.68
YBX1P67809 AC090115.3-201ENST00000553218 849 ntBASIC4.53□□□□□ -1.68
YBX1P67809 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.53□□□□□ -1.68
YBX1P67809 AL121576.1-201ENST00000556055 276 ntBASIC4.53□□□□□ -1.68
YBX1P67809 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.53□□□□□ -1.68
YBX1P67809 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.53□□□□□ -1.68
YBX1P67809 AC136624.4-201ENST00000573044 370 ntBASIC4.53□□□□□ -1.68
YBX1P67809 RN7SL652P-201ENST00000577769 300 ntBASIC4.53□□□□□ -1.68
YBX1P67809 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.53□□□□□ -1.68
YBX1P67809 MIR4270-201ENST00000581799 70 ntBASIC4.53□□□□□ -1.68
YBX1P67809 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.53□□□□□ -1.68
YBX1P67809 AL138889.2-201ENST00000603883 242 ntBASIC4.53□□□□□ -1.68
YBX1P67809 AL451044.1-201ENST00000604867 238 ntBASIC4.53□□□□□ -1.68
YBX1P67809 AC078938.1-201ENST00000620993 318 ntBASIC4.53□□□□□ -1.68
YBX1P67809 SAGE4P-201ENST00000442271 3381 ntBASIC4.53□□□□□ -1.68
YBX1P67809 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
YBX1P67809 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
YBX1P67809 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
YBX1P67809 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
YBX1P67809 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
YBX1P67809 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
YBX1P67809 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
YBX1P67809 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
YBX1P67809 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
YBX1P67809 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.53□□□□□ -1.68
YBX1P67809 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
YBX1P67809 AC103710.2-202ENST00000641454 2853 ntBASIC4.52□□□□□ -1.69
YBX1P67809 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
YBX1P67809 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.52□□□□□ -1.69
YBX1P67809 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
YBX1P67809 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
YBX1P67809 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
YBX1P67809 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.52□□□□□ -1.69
YBX1P67809 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
YBX1P67809 SNORA70.2-201ENST00000364506 135 ntBASIC4.52□□□□□ -1.69
YBX1P67809 RNU1-115P-201ENST00000365329 160 ntBASIC4.52□□□□□ -1.69
YBX1P67809 RNA5SP151-201ENST00000365632 117 ntBASIC4.52□□□□□ -1.69
YBX1P67809 Y_RNA.485-201ENST00000384395 102 ntBASIC4.52□□□□□ -1.69
YBX1P67809 RNA5SP296-201ENST00000410523 111 ntBASIC4.52□□□□□ -1.69
YBX1P67809 EIF4A1P3-201ENST00000411521 244 ntBASIC4.52□□□□□ -1.69
YBX1P67809 RPLP0P7-201ENST00000416050 667 ntBASIC4.52□□□□□ -1.69
YBX1P67809 BX510359.2-201ENST00000417920 305 ntBASIC4.52□□□□□ -1.69
YBX1P67809 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.52□□□□□ -1.69
YBX1P67809 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.52□□□□□ -1.69
YBX1P67809 DNAJC19P7-201ENST00000428811 344 ntBASIC4.52□□□□□ -1.69
YBX1P67809 AC016712.1-201ENST00000431088 378 ntBASIC4.52□□□□□ -1.69
YBX1P67809 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.52□□□□□ -1.69
YBX1P67809 PPIAP3-201ENST00000450588 505 ntBASIC4.52□□□□□ -1.69
YBX1P67809 FABP5P13-201ENST00000452144 328 ntBASIC4.52□□□□□ -1.69
YBX1P67809 AC053481.1-201ENST00000467217 306 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms