Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
AP3S2P59780 RNU1-148P-201ENST00000384472 162 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 MIR518C-201ENST00000384822 101 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 MIR676-201ENST00000390702 67 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.87□□□□□ -2.11
AP3S2P59780 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.87□□□□□ -2.11
AP3S2P59780 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.87□□□□□ -2.11
AP3S2P59780 AC093106.2-201ENST00000428212 385 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 ARL5AP4-201ENST00000430731 512 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 AC091390.1-201ENST00000433904 331 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 AL451074.3-201ENST00000437709 472 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.87□□□□□ -2.11
AP3S2P59780 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.87□□□□□ -2.11
AP3S2P59780 AL050341.1-201ENST00000447743 313 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 MTCO1P48-201ENST00000448024 1096 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
AP3S2P59780 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.87□□□□□ -2.11
AP3S2P59780 MTCO2P9-201ENST00000503214 694 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 SETP12-201ENST00000514068 805 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.87□□□□□ -2.11
AP3S2P59780 CYCSP2-201ENST00000558168 301 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC1.87□□□□□ -2.11
AP3S2P59780 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.87□□□□□ -2.11
AP3S2P59780 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.87□□□□□ -2.11
AP3S2P59780 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 AL163051.2-201ENST00000618976 735 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 AP003400.5-201ENST00000624827 617 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 OR4G2P-202ENST00000641004 1759 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 AC008432.1-201ENST00000615912 1320 ntBASIC1.87□□□□□ -2.11
AP3S2P59780 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
AP3S2P59780 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.86□□□□□ -2.11
AP3S2P59780 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.86□□□□□ -2.11
AP3S2P59780 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
AP3S2P59780 ANKRD36P1-201ENST00000344424 659 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 RNU6-741P-201ENST00000383889 107 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 RPS4XP8-201ENST00000402039 771 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
AP3S2P59780 AL450338.1-201ENST00000407987 512 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 RN7SKP158-201ENST00000410453 326 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 RNA5SP338-201ENST00000410495 85 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 HMGB1P11-201ENST00000413899 637 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 AC096649.2-201ENST00000416186 393 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 AC018630.2-202ENST00000422992 927 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 MYL8P-204ENST00000431574 518 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.86□□□□□ -2.11
AP3S2P59780 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.86□□□□□ -2.11
AP3S2P59780 RSL24D1P3-201ENST00000449255 495 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.86□□□□□ -2.11
AP3S2P59780 PMCHL2-203ENST00000457791 237 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 SNORD109B-201ENST00000458961 67 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 SNORD109A-201ENST00000459128 67 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 AC098591.2-201ENST00000510152 315 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 MRPS17P9-201ENST00000511924 393 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.86□□□□□ -2.11
AP3S2P59780 MTCYBP20-201ENST00000524239 1129 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.86□□□□□ -2.11
AP3S2P59780 AL133241.1-201ENST00000556832 487 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.86□□□□□ -2.11
AP3S2P59780 AL109918.3-201ENST00000603072 338 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.86□□□□□ -2.11
AP3S2P59780 AC007621.1-201ENST00000604544 437 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 AL355802.4-201ENST00000607635 548 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 AC010678.1-201ENST00000614118 713 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 AL450472.3-201ENST00000615578 367 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 AL445493.3-201ENST00000619568 477 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 AC012314.7-201ENST00000619693 93 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 uc_338.20-201ENST00000621563 178 ntBASIC1.86□□□□□ -2.11
AP3S2P59780 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.86□□□□□ -2.11
AP3S2P59780 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
AP3S2P59780 MTND5P1-201ENST00000445440 1375 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
AP3S2P59780 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.85□□□□□ -2.11
AP3S2P59780 GSTA9P-201ENST00000406231 611 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 SNORA11B-201ENST00000408175 129 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.85□□□□□ -2.11
AP3S2P59780 KRR1P1-201ENST00000419430 803 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.85□□□□□ -2.11
AP3S2P59780 AC003685.2-201ENST00000422795 395 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.85□□□□□ -2.11
AP3S2P59780 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.85□□□□□ -2.11
AP3S2P59780 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.85□□□□□ -2.11
AP3S2P59780 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
AP3S2P59780 MTND2P24-201ENST00000453434 806 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 MTND2P6-201ENST00000455337 1030 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 AC080013.2-201ENST00000460866 323 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 AL121769.1-201ENST00000469473 401 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 AC234781.5-201ENST00000508429 271 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 AC048346.1-201ENST00000510247 144 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 AC109471.1-201ENST00000511631 612 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.85□□□□□ -2.11
AP3S2P59780 RNA5SP200-201ENST00000516360 103 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 SNORA31.22-201ENST00000517204 135 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.85□□□□□ -2.11
AP3S2P59780 HMGB1P1-201ENST00000522557 636 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 AC118273.2-201ENST00000532092 465 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
AP3S2P59780 AC093519.1-201ENST00000566109 298 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 MIR4529-201ENST00000578110 78 ntBASIC1.85□□□□□ -2.11
AP3S2P59780 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.85□□□□□ -2.11
AP3S2P59780 ELOCP29-201ENST00000588193 334 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms