Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AL356596.1-201ENST00000624230 379 ntBASIC3.08□□□□□ -1.92
PEX3P56589 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.08□□□□□ -1.92
PEX3P56589 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PEX3P56589 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PEX3P56589 AP001350.1-201ENST00000601906 1524 ntBASIC3.08□□□□□ -1.92
PEX3P56589 AC116096.1-201ENST00000566804 2314 ntBASIC3.08□□□□□ -1.92
PEX3P56589 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PEX3P56589 OR5J1P-201ENST00000313544 939 ntBASIC3.07□□□□□ -1.92
PEX3P56589 AL672167.1-206ENST00000356293 943 ntBASIC3.07□□□□□ -1.92
PEX3P56589 RNU6-600P-201ENST00000362524 99 ntBASIC3.07□□□□□ -1.92
PEX3P56589 RNU6-553P-201ENST00000364047 96 ntBASIC3.07□□□□□ -1.92
PEX3P56589 RNU6-744P-201ENST00000365557 107 ntBASIC3.07□□□□□ -1.92
PEX3P56589 U8.9-201ENST00000365667 134 ntBASIC3.07□□□□□ -1.92
PEX3P56589 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.07□□□□□ -1.92
PEX3P56589 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.07□□□□□ -1.92
PEX3P56589 RNU6-1316P-201ENST00000384242 108 ntBASIC3.07□□□□□ -1.92
PEX3P56589 RNU2-47P-201ENST00000410649 186 ntBASIC3.07□□□□□ -1.92
PEX3P56589 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.07□□□□□ -1.92
PEX3P56589 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.07□□□□□ -1.92
PEX3P56589 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.07□□□□□ -1.92
PEX3P56589 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.07□□□□□ -1.92
PEX3P56589 RPL21P112-201ENST00000434403 463 ntBASIC3.07□□□□□ -1.92
PEX3P56589 AC105272.1-201ENST00000438604 198 ntBASIC3.07□□□□□ -1.92
PEX3P56589 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.07□□□□□ -1.92
PEX3P56589 RPL7P52-201ENST00000449200 742 ntBASIC3.07□□□□□ -1.92
PEX3P56589 AC104308.1-201ENST00000454621 333 ntBASIC3.07□□□□□ -1.92
PEX3P56589 RNU7-125P-201ENST00000458760 62 ntBASIC3.07□□□□□ -1.92
PEX3P56589 SNORD121B-201ENST00000458838 81 ntBASIC3.07□□□□□ -1.92
PEX3P56589 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.07□□□□□ -1.92
PEX3P56589 AC003982.1-202ENST00000469928 248 ntBASIC3.07□□□□□ -1.92
PEX3P56589 RPL23AP55-201ENST00000498163 452 ntBASIC3.07□□□□□ -1.92
PEX3P56589 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.07□□□□□ -1.92
PEX3P56589 AC119751.5-201ENST00000514077 770 ntBASIC3.07□□□□□ -1.92
PEX3P56589 SNORA31.26-201ENST00000517250 137 ntBASIC3.07□□□□□ -1.92
PEX3P56589 AC109635.4-202ENST00000531666 412 ntBASIC3.07□□□□□ -1.92
PEX3P56589 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PEX3P56589 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.07□□□□□ -1.92
PEX3P56589 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.07□□□□□ -1.92
PEX3P56589 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.07□□□□□ -1.92
PEX3P56589 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.07□□□□□ -1.92
PEX3P56589 AC090615.1-201ENST00000577519 154 ntBASIC3.07□□□□□ -1.92
PEX3P56589 MIR3690-201ENST00000580266 75 ntBASIC3.07□□□□□ -1.92
PEX3P56589 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.07□□□□□ -1.92
PEX3P56589 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PEX3P56589 ZNF861P-201ENST00000588126 639 ntBASIC3.07□□□□□ -1.92
PEX3P56589 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.07□□□□□ -1.92
PEX3P56589 AF131215.7-201ENST00000602443 707 ntBASIC3.07□□□□□ -1.92
PEX3P56589 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
PEX3P56589 AC022079.1-201ENST00000621546 602 ntBASIC3.07□□□□□ -1.92
PEX3P56589 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.07□□□□□ -1.92
PEX3P56589 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PEX3P56589 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PEX3P56589 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PEX3P56589 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.07□□□□□ -1.92
PEX3P56589 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PEX3P56589 GABRG2-229ENST00000641017 3628 ntBASIC3.07□□□□□ -1.92
PEX3P56589 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
PEX3P56589 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PEX3P56589 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PEX3P56589 Y_RNA.18-201ENST00000362461 102 ntBASIC3.06□□□□□ -1.92
PEX3P56589 Y_RNA.169-201ENST00000363745 96 ntBASIC3.06□□□□□ -1.92
PEX3P56589 RNU6-660P-201ENST00000364566 109 ntBASIC3.06□□□□□ -1.92
PEX3P56589 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PEX3P56589 U3.26-201ENST00000391236 204 ntBASIC3.06□□□□□ -1.92
PEX3P56589 SNORA26.7-201ENST00000391288 122 ntBASIC3.06□□□□□ -1.92
PEX3P56589 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.06□□□□□ -1.92
PEX3P56589 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.06□□□□□ -1.92
PEX3P56589 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.06□□□□□ -1.92
PEX3P56589 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.06□□□□□ -1.92
PEX3P56589 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.06□□□□□ -1.92
PEX3P56589 LSM1P1-201ENST00000438629 273 ntBASIC3.06□□□□□ -1.92
PEX3P56589 AL513043.1-201ENST00000439124 535 ntBASIC3.06□□□□□ -1.92
PEX3P56589 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.06□□□□□ -1.92
PEX3P56589 OR6K5P-201ENST00000447050 945 ntBASIC3.06□□□□□ -1.92
PEX3P56589 HMGB1P15-201ENST00000453854 435 ntBASIC3.06□□□□□ -1.92
PEX3P56589 RPL30P9-201ENST00000465586 330 ntBASIC3.06□□□□□ -1.92
PEX3P56589 RPS26P21-201ENST00000475397 348 ntBASIC3.06□□□□□ -1.92
PEX3P56589 RPL30P6-201ENST00000475925 342 ntBASIC3.06□□□□□ -1.92
PEX3P56589 AC104563.1-201ENST00000476147 376 ntBASIC3.06□□□□□ -1.92
PEX3P56589 AL049873.1-201ENST00000480540 376 ntBASIC3.06□□□□□ -1.92
PEX3P56589 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.06□□□□□ -1.92
PEX3P56589 HMGB3P15-201ENST00000507326 574 ntBASIC3.06□□□□□ -1.92
PEX3P56589 RNU6-678P-201ENST00000516832 109 ntBASIC3.06□□□□□ -1.92
PEX3P56589 RNU6-232P-201ENST00000517144 64 ntBASIC3.06□□□□□ -1.92
PEX3P56589 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.06□□□□□ -1.92
PEX3P56589 CR383656.7-201ENST00000548164 174 ntBASIC3.06□□□□□ -1.92
PEX3P56589 GTF3AP2-201ENST00000557014 266 ntBASIC3.06□□□□□ -1.92
PEX3P56589 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.06□□□□□ -1.92
PEX3P56589 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.06□□□□□ -1.92
PEX3P56589 AC012182.1-201ENST00000570133 895 ntBASIC3.06□□□□□ -1.92
PEX3P56589 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.06□□□□□ -1.92
PEX3P56589 AL133393.1-201ENST00000603277 287 ntBASIC3.06□□□□□ -1.92
PEX3P56589 AL357094.1-201ENST00000603845 844 ntBASIC3.06□□□□□ -1.92
PEX3P56589 AL590282.1-201ENST00000610379 1136 ntBASIC3.06□□□□□ -1.92
PEX3P56589 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.06□□□□□ -1.92
PEX3P56589 AL603755.1-201ENST00000619504 163 ntBASIC3.06□□□□□ -1.92
PEX3P56589 AC002550.2-201ENST00000621246 394 ntBASIC3.06□□□□□ -1.92
PEX3P56589 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PEX3P56589 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PEX3P56589 MAPK10-266ENST00000641066 6555 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms