Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MIR4425-201ENST00000580572 84 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 AP001029.3-201ENST00000588063 596 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 AL359999.1-201ENST00000604513 294 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 AL021997.1-201ENST00000605757 193 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 OR10AB1P-201ENST00000609613 938 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 AC091304.9-201ENST00000612091 226 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 AL355810.1-201ENST00000614629 552 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.71□□□□□ -1.82
HDAC4P56524 AL392088.2-201ENST00000637607 285 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
HDAC4P56524 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HDAC4P56524 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.71□□□□□ -1.82
HDAC4P56524 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
HDAC4P56524 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HDAC4P56524 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HDAC4P56524 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.7□□□□□ -1.82
HDAC4P56524 Y_RNA.3-201ENST00000362331 103 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 RNU6-1078P-201ENST00000364522 103 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 RPL31P12-201ENST00000422587 358 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.7□□□□□ -1.82
HDAC4P56524 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.7□□□□□ -1.82
HDAC4P56524 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.7□□□□□ -1.82
HDAC4P56524 AL049734.2-201ENST00000441066 616 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 MTCYBP1-201ENST00000454315 1119 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.7□□□□□ -1.82
HDAC4P56524 RPL23AP41-201ENST00000484754 458 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.7□□□□□ -1.82
HDAC4P56524 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.7□□□□□ -1.82
HDAC4P56524 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.7□□□□□ -1.82
HDAC4P56524 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.7□□□□□ -1.82
HDAC4P56524 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.7□□□□□ -1.82
HDAC4P56524 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.7□□□□□ -1.82
HDAC4P56524 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 AP002453.2-201ENST00000533503 320 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.7□□□□□ -1.82
HDAC4P56524 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.7□□□□□ -1.82
HDAC4P56524 AL157394.1-201ENST00000562983 1224 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 AC009063.1-201ENST00000563342 702 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.7□□□□□ -1.82
HDAC4P56524 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.7□□□□□ -1.82
HDAC4P56524 AC073648.5-201ENST00000603502 305 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 AC091805.2-201ENST00000603848 235 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 AC090578.1-201ENST00000604955 591 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 AC013476.2-201ENST00000614456 459 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 AC015540.1-201ENST00000615828 501 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 AC009159.1-201ENST00000618386 642 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.7□□□□□ -1.82
HDAC4P56524 MIR7153-201ENST00000637758 57 ntBASIC3.7□□□□□ -1.82
HDAC4P56524 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
HDAC4P56524 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.69□□□□□ -1.82
HDAC4P56524 AC068647.1-201ENST00000489539 2265 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HDAC4P56524 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
HDAC4P56524 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HDAC4P56524 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HDAC4P56524 U8.3-201ENST00000363321 132 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 SNORA73.2-201ENST00000364946 201 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 RNU6-192P-201ENST00000391253 100 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 SNORA48.8-201ENST00000391324 134 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HDAC4P56524 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
HDAC4P56524 AC093578.1-201ENST00000415219 368 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AL353777.1-201ENST00000425552 326 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AL589872.1-201ENST00000426602 288 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AC104651.1-201ENST00000427559 735 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 CYCSP4-201ENST00000429682 331 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.69□□□□□ -1.82
HDAC4P56524 AC009961.2-201ENST00000435771 251 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 RPL17P49-201ENST00000443728 411 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.69□□□□□ -1.82
HDAC4P56524 GAPDHP17-201ENST00000449858 1001 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.69□□□□□ -1.82
HDAC4P56524 KLF3P2-201ENST00000465138 268 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 RN7SL594P-201ENST00000470590 287 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AC055855.1-201ENST00000489563 579 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AC092185.1-201ENST00000491371 97 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AC026427.2-201ENST00000506228 536 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.69□□□□□ -1.82
HDAC4P56524 AC110768.1-201ENST00000509222 400 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AC109464.2-201ENST00000510242 943 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AC104619.4-201ENST00000510773 249 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.69□□□□□ -1.82
HDAC4P56524 RN7SKP13-201ENST00000515933 244 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 RN7SKP18-201ENST00000516005 275 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 RNU2-46P-201ENST00000517038 113 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AC022616.6-201ENST00000520479 119 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AP000907.2-201ENST00000530827 353 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.69□□□□□ -1.82
HDAC4P56524 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.69□□□□□ -1.82
HDAC4P56524 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.69□□□□□ -1.82
HDAC4P56524 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.69□□□□□ -1.82
HDAC4P56524 OR4T1P-201ENST00000554933 911 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.69□□□□□ -1.82
HDAC4P56524 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.69□□□□□ -1.82
HDAC4P56524 EIF1P4-201ENST00000572664 335 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 OR4K8P-201ENST00000578842 1048 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AC080078.2-201ENST00000603766 501 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AL158211.4-201ENST00000606988 584 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AC087241.4-201ENST00000612441 480 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AC008250.2-201ENST00000615261 205 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms