Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 HSPE1P6-201ENST00000479457 291 ntBASIC2.69□□□□□ -1.98
LIM2P55344 HMGB1P36-201ENST00000487709 576 ntBASIC2.69□□□□□ -1.98
LIM2P55344 AC109464.2-201ENST00000510242 943 ntBASIC2.69□□□□□ -1.98
LIM2P55344 AC034159.1-201ENST00000513885 583 ntBASIC2.69□□□□□ -1.98
LIM2P55344 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.69□□□□□ -1.98
LIM2P55344 RNA5SP76-201ENST00000516277 87 ntBASIC2.69□□□□□ -1.98
LIM2P55344 SNORA31.22-201ENST00000517204 135 ntBASIC2.69□□□□□ -1.98
LIM2P55344 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.69□□□□□ -1.98
LIM2P55344 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.69□□□□□ -1.98
LIM2P55344 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.69□□□□□ -1.98
LIM2P55344 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.69□□□□□ -1.98
LIM2P55344 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.69□□□□□ -1.98
LIM2P55344 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.69□□□□□ -1.98
LIM2P55344 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.69□□□□□ -1.98
LIM2P55344 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.69□□□□□ -1.98
LIM2P55344 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.69□□□□□ -1.98
LIM2P55344 AC024153.1-201ENST00000603103 365 ntBASIC2.69□□□□□ -1.98
LIM2P55344 AC112187.2-201ENST00000604345 283 ntBASIC2.69□□□□□ -1.98
LIM2P55344 AC093424.1-201ENST00000604999 338 ntBASIC2.69□□□□□ -1.98
LIM2P55344 AC008962.1-201ENST00000605729 304 ntBASIC2.69□□□□□ -1.98
LIM2P55344 AC090115.4-201ENST00000609970 188 ntBASIC2.69□□□□□ -1.98
LIM2P55344 AC107871.2-201ENST00000612894 502 ntBASIC2.69□□□□□ -1.98
LIM2P55344 AL139418.1-201ENST00000613613 177 ntBASIC2.69□□□□□ -1.98
LIM2P55344 AL355493.4-201ENST00000618530 292 ntBASIC2.69□□□□□ -1.98
LIM2P55344 AC010338.1-201ENST00000621823 717 ntBASIC2.69□□□□□ -1.98
LIM2P55344 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
LIM2P55344 MAPK10-362ENST00000641864 4484 ntBASIC2.69□□□□□ -1.98
LIM2P55344 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
LIM2P55344 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LIM2P55344 AC104454.1-201ENST00000421341 1401 ntBASIC2.68□□□□□ -1.98
LIM2P55344 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.68□□□□□ -1.98
LIM2P55344 AC011460.1-201ENST00000636268 1834 ntBASIC2.68□□□□□ -1.98
LIM2P55344 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LIM2P55344 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LIM2P55344 Y_RNA.18-201ENST00000362461 102 ntBASIC2.68□□□□□ -1.98
LIM2P55344 Y_RNA.548-201ENST00000384656 105 ntBASIC2.68□□□□□ -1.98
LIM2P55344 MIR493-201ENST00000385254 89 ntBASIC2.68□□□□□ -1.98
LIM2P55344 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LIM2P55344 RPS4XP3-201ENST00000398541 413 ntBASIC2.68□□□□□ -1.98
LIM2P55344 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.68□□□□□ -1.98
LIM2P55344 AL590084.2-201ENST00000401481 382 ntBASIC2.68□□□□□ -1.98
LIM2P55344 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.68□□□□□ -1.98
LIM2P55344 AC098592.1-201ENST00000419352 333 ntBASIC2.68□□□□□ -1.98
LIM2P55344 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.68□□□□□ -1.98
LIM2P55344 OR2B8P-201ENST00000432841 938 ntBASIC2.68□□□□□ -1.98
LIM2P55344 AL354941.1-201ENST00000438600 464 ntBASIC2.68□□□□□ -1.98
LIM2P55344 AL008629.1-201ENST00000438615 184 ntBASIC2.68□□□□□ -1.98
LIM2P55344 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LIM2P55344 AL590664.1-201ENST00000448065 339 ntBASIC2.68□□□□□ -1.98
LIM2P55344 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.68□□□□□ -1.98
LIM2P55344 RPL30P5-201ENST00000494923 336 ntBASIC2.68□□□□□ -1.98
LIM2P55344 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.68□□□□□ -1.98
LIM2P55344 MTCYBP43-201ENST00000513621 740 ntBASIC2.68□□□□□ -1.98
LIM2P55344 RNA5SP385-201ENST00000515947 110 ntBASIC2.68□□□□□ -1.98
LIM2P55344 IGHV3-76-201ENST00000522465 295 ntBASIC2.68□□□□□ -1.98
LIM2P55344 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.68□□□□□ -1.98
LIM2P55344 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.68□□□□□ -1.98
LIM2P55344 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.68□□□□□ -1.98
LIM2P55344 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.68□□□□□ -1.98
LIM2P55344 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.68□□□□□ -1.98
LIM2P55344 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.68□□□□□ -1.98
LIM2P55344 AC068313.1-201ENST00000604028 1008 ntBASIC2.68□□□□□ -1.98
LIM2P55344 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.68□□□□□ -1.98
LIM2P55344 AC069234.5-201ENST00000611056 416 ntBASIC2.68□□□□□ -1.98
LIM2P55344 AC013476.2-201ENST00000614456 459 ntBASIC2.68□□□□□ -1.98
LIM2P55344 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.68□□□□□ -1.98
LIM2P55344 Z99129.2-201ENST00000619967 314 ntBASIC2.68□□□□□ -1.98
LIM2P55344 AC006111.3-201ENST00000622137 383 ntBASIC2.68□□□□□ -1.98
LIM2P55344 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.68□□□□□ -1.98
LIM2P55344 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.68□□□□□ -1.98
LIM2P55344 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LIM2P55344 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LIM2P55344 DDX10P1-201ENST00000448545 1933 ntBASIC2.68□□□□□ -1.98
LIM2P55344 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.67□□□□□ -1.98
LIM2P55344 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LIM2P55344 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
LIM2P55344 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LIM2P55344 RNU5A-1-201ENST00000362698 116 ntBASIC2.67□□□□□ -1.98
LIM2P55344 RNU6-433P-201ENST00000363216 104 ntBASIC2.67□□□□□ -1.98
LIM2P55344 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
LIM2P55344 SNORA18.3-201ENST00000384122 132 ntBASIC2.67□□□□□ -1.98
LIM2P55344 RPL5P18-201ENST00000406671 891 ntBASIC2.67□□□□□ -1.98
LIM2P55344 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LIM2P55344 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.67□□□□□ -1.98
LIM2P55344 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.67□□□□□ -1.98
LIM2P55344 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.67□□□□□ -1.98
LIM2P55344 AC093151.1-201ENST00000427711 313 ntBASIC2.67□□□□□ -1.98
LIM2P55344 RPL21P40-201ENST00000428586 483 ntBASIC2.67□□□□□ -1.98
LIM2P55344 AC093156.1-201ENST00000440382 670 ntBASIC2.67□□□□□ -1.98
LIM2P55344 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.67□□□□□ -1.98
LIM2P55344 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.67□□□□□ -1.98
LIM2P55344 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.67□□□□□ -1.98
LIM2P55344 AL359385.1-201ENST00000456509 365 ntBASIC2.67□□□□□ -1.98
LIM2P55344 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.67□□□□□ -1.98
LIM2P55344 AP1S2P1-201ENST00000457344 379 ntBASIC2.67□□□□□ -1.98
LIM2P55344 HIGD1AP13-201ENST00000509878 289 ntBASIC2.67□□□□□ -1.98
LIM2P55344 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.67□□□□□ -1.98
LIM2P55344 MTND5P4-201ENST00000514978 288 ntBASIC2.67□□□□□ -1.98
LIM2P55344 SNORA31.1-201ENST00000515993 133 ntBASIC2.67□□□□□ -1.98
LIM2P55344 SNORA31.5-201ENST00000516190 133 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms