Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH12P55289 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH12P55289 SNORA31.20-201ENST00000517111 133 ntBASIC3.48□□□□□ -1.85
CDH12P55289 HMGB1P41-201ENST00000520234 440 ntBASIC3.48□□□□□ -1.85
CDH12P55289 HMGN1P28-201ENST00000521340 364 ntBASIC3.48□□□□□ -1.85
CDH12P55289 AC022695.1-201ENST00000522089 237 ntBASIC3.48□□□□□ -1.85
CDH12P55289 FAM60DP-201ENST00000524174 632 ntBASIC3.48□□□□□ -1.85
CDH12P55289 MTND1P35-201ENST00000526739 508 ntBASIC3.48□□□□□ -1.85
CDH12P55289 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH12P55289 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH12P55289 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH12P55289 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH12P55289 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.48□□□□□ -1.85
CDH12P55289 AC007621.1-201ENST00000604544 437 ntBASIC3.48□□□□□ -1.85
CDH12P55289 AL022099.1-201ENST00000604551 712 ntBASIC3.48□□□□□ -1.85
CDH12P55289 AL603758.1-201ENST00000618654 241 ntBASIC3.48□□□□□ -1.85
CDH12P55289 AC079684.1-201ENST00000621405 437 ntBASIC3.48□□□□□ -1.85
CDH12P55289 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH12P55289 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH12P55289 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH12P55289 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH12P55289 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH12P55289 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH12P55289 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CDH12P55289 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH12P55289 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDH12P55289 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDH12P55289 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH12P55289 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH12P55289 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH12P55289 DDX10P1-201ENST00000448545 1933 ntBASIC3.47□□□□□ -1.85
CDH12P55289 HSPE1P11-201ENST00000339579 310 ntBASIC3.47□□□□□ -1.85
CDH12P55289 RNU6-223P-201ENST00000362830 107 ntBASIC3.47□□□□□ -1.85
CDH12P55289 Y_RNA.367-201ENST00000365544 101 ntBASIC3.47□□□□□ -1.85
CDH12P55289 Y_RNA.481-201ENST00000384373 102 ntBASIC3.47□□□□□ -1.85
CDH12P55289 RNU6-1158P-201ENST00000391167 107 ntBASIC3.47□□□□□ -1.85
CDH12P55289 AL136372.1-201ENST00000403060 228 ntBASIC3.47□□□□□ -1.85
CDH12P55289 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH12P55289 AC016769.2-201ENST00000414815 475 ntBASIC3.47□□□□□ -1.85
CDH12P55289 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH12P55289 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH12P55289 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH12P55289 SDCBPP3-201ENST00000419629 891 ntBASIC3.47□□□□□ -1.85
CDH12P55289 PPP1R11P2-201ENST00000423543 382 ntBASIC3.47□□□□□ -1.85
CDH12P55289 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH12P55289 OR2AS1P-201ENST00000427827 319 ntBASIC3.47□□□□□ -1.85
CDH12P55289 AL606489.2-201ENST00000433886 234 ntBASIC3.47□□□□□ -1.85
CDH12P55289 RPS20P5-201ENST00000434808 360 ntBASIC3.47□□□□□ -1.85
CDH12P55289 USP9YP7-201ENST00000436723 430 ntBASIC3.47□□□□□ -1.85
CDH12P55289 HMGB1P31-201ENST00000437242 427 ntBASIC3.47□□□□□ -1.85
CDH12P55289 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH12P55289 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH12P55289 WASF1P1-201ENST00000447560 1131 ntBASIC3.47□□□□□ -1.85
CDH12P55289 AL162151.2-201ENST00000448875 158 ntBASIC3.47□□□□□ -1.85
CDH12P55289 USP9YP32-201ENST00000452432 430 ntBASIC3.47□□□□□ -1.85
CDH12P55289 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH12P55289 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH12P55289 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH12P55289 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDH12P55289 PRDX4P1-201ENST00000507189 574 ntBASIC3.47□□□□□ -1.85
CDH12P55289 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH12P55289 RNU6-1281P-201ENST00000516223 105 ntBASIC3.47□□□□□ -1.85
CDH12P55289 RNU2-10P-201ENST00000516375 211 ntBASIC3.47□□□□□ -1.85
CDH12P55289 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH12P55289 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH12P55289 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH12P55289 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH12P55289 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDH12P55289 RPL21P12-201ENST00000559810 515 ntBASIC3.47□□□□□ -1.85
CDH12P55289 AC034105.3-201ENST00000565294 442 ntBASIC3.47□□□□□ -1.85
CDH12P55289 MTCO3P24-201ENST00000572729 782 ntBASIC3.47□□□□□ -1.85
CDH12P55289 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.47□□□□□ -1.85
CDH12P55289 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH12P55289 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH12P55289 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDH12P55289 AL355073.2-201ENST00000612106 557 ntBASIC3.47□□□□□ -1.85
CDH12P55289 AC002553.4-201ENST00000616896 331 ntBASIC3.47□□□□□ -1.85
CDH12P55289 AL713922.2-201ENST00000619384 716 ntBASIC3.47□□□□□ -1.85
CDH12P55289 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH12P55289 AC005609.4-201ENST00000625071 447 ntBASIC3.47□□□□□ -1.85
CDH12P55289 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH12P55289 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CDH12P55289 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CDH12P55289 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDH12P55289 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CDH12P55289 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CDH12P55289 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CDH12P55289 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH12P55289 MAPK10-372ENST00000641954 3413 ntBASIC3.46□□□□□ -1.86
CDH12P55289 Y_RNA.38-201ENST00000362617 102 ntBASIC3.46□□□□□ -1.86
CDH12P55289 Y_RNA.88-201ENST00000363029 99 ntBASIC3.46□□□□□ -1.86
CDH12P55289 RNU6-1322P-201ENST00000364309 107 ntBASIC3.46□□□□□ -1.86
CDH12P55289 RNU6-283P-201ENST00000364788 107 ntBASIC3.46□□□□□ -1.86
CDH12P55289 Y_RNA.295-201ENST00000364918 102 ntBASIC3.46□□□□□ -1.86
CDH12P55289 RNU5E-6P-201ENST00000365574 115 ntBASIC3.46□□□□□ -1.86
CDH12P55289 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CDH12P55289 RNU6-908P-201ENST00000410160 94 ntBASIC3.46□□□□□ -1.86
CDH12P55289 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH12P55289 NDUFB1P1-201ENST00000435191 180 ntBASIC3.46□□□□□ -1.86
CDH12P55289 MTCO3P45-201ENST00000443036 613 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms