Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC116312.1-201ENST00000606841 314 ntBASIC4.83□□□□□ -1.64
PMS1P54277 AL355802.3-201ENST00000607571 545 ntBASIC4.83□□□□□ -1.64
PMS1P54277 AC022893.3-201ENST00000607665 437 ntBASIC4.83□□□□□ -1.64
PMS1P54277 Mico1.1-201ENST00000611698 204 ntBASIC4.83□□□□□ -1.64
PMS1P54277 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.83□□□□□ -1.64
PMS1P54277 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.83□□□□□ -1.64
PMS1P54277 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PMS1P54277 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PMS1P54277 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
PMS1P54277 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PMS1P54277 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PMS1P54277 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PMS1P54277 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PMS1P54277 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PMS1P54277 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PMS1P54277 NOL8P1-201ENST00000508336 3529 ntBASIC4.82□□□□□ -1.64
PMS1P54277 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
PMS1P54277 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.82□□□□□ -1.64
PMS1P54277 RNU1-15P-201ENST00000353977 144 ntBASIC4.82□□□□□ -1.64
PMS1P54277 RPL32P3-201ENST00000359025 275 ntBASIC4.82□□□□□ -1.64
PMS1P54277 RNU6-254P-201ENST00000363377 107 ntBASIC4.82□□□□□ -1.64
PMS1P54277 Y_RNA.146-201ENST00000363549 102 ntBASIC4.82□□□□□ -1.64
PMS1P54277 RNU2-43P-201ENST00000410306 190 ntBASIC4.82□□□□□ -1.64
PMS1P54277 TMSB10P2-201ENST00000416049 131 ntBASIC4.82□□□□□ -1.64
PMS1P54277 SSXP9-201ENST00000417503 292 ntBASIC4.82□□□□□ -1.64
PMS1P54277 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PMS1P54277 RPL23AP89-201ENST00000439324 255 ntBASIC4.82□□□□□ -1.64
PMS1P54277 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.82□□□□□ -1.64
PMS1P54277 ABCF2P2-201ENST00000450549 296 ntBASIC4.82□□□□□ -1.64
PMS1P54277 AL162388.1-201ENST00000450912 352 ntBASIC4.82□□□□□ -1.64
PMS1P54277 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.82□□□□□ -1.64
PMS1P54277 RPL35AP15-201ENST00000468042 339 ntBASIC4.82□□□□□ -1.64
PMS1P54277 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.82□□□□□ -1.64
PMS1P54277 RPS27P27-201ENST00000498779 255 ntBASIC4.82□□□□□ -1.64
PMS1P54277 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.82□□□□□ -1.64
PMS1P54277 AC015795.1-201ENST00000513669 327 ntBASIC4.82□□□□□ -1.64
PMS1P54277 COPS8P3-201ENST00000526024 482 ntBASIC4.82□□□□□ -1.64
PMS1P54277 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PMS1P54277 AP006289.1-201ENST00000538089 277 ntBASIC4.82□□□□□ -1.64
PMS1P54277 MTND6P33-201ENST00000571794 183 ntBASIC4.82□□□□□ -1.64
PMS1P54277 AC007151.1-201ENST00000572774 483 ntBASIC4.82□□□□□ -1.64
PMS1P54277 AC069061.3-201ENST00000582254 823 ntBASIC4.82□□□□□ -1.64
PMS1P54277 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.82□□□□□ -1.64
PMS1P54277 U2.17-201ENST00000611454 95 ntBASIC4.82□□□□□ -1.64
PMS1P54277 AL161616.1-201ENST00000611867 286 ntBASIC4.82□□□□□ -1.64
PMS1P54277 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PMS1P54277 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.82□□□□□ -1.64
PMS1P54277 AL023881.1-201ENST00000621088 301 ntBASIC4.82□□□□□ -1.64
PMS1P54277 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.82□□□□□ -1.64
PMS1P54277 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PMS1P54277 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PMS1P54277 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PMS1P54277 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PMS1P54277 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PMS1P54277 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PMS1P54277 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.81□□□□□ -1.64
PMS1P54277 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PMS1P54277 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PMS1P54277 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.81□□□□□ -1.64
PMS1P54277 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PMS1P54277 AC079741.1-201ENST00000321498 212 ntBASIC4.81□□□□□ -1.64
PMS1P54277 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.81□□□□□ -1.64
PMS1P54277 BX682237.1-201ENST00000415016 335 ntBASIC4.81□□□□□ -1.64
PMS1P54277 Z82205.1-201ENST00000428456 297 ntBASIC4.81□□□□□ -1.64
PMS1P54277 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.81□□□□□ -1.64
PMS1P54277 FABP5P14-201ENST00000437273 393 ntBASIC4.81□□□□□ -1.64
PMS1P54277 FGF7P3-201ENST00000454645 303 ntBASIC4.81□□□□□ -1.64
PMS1P54277 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.81□□□□□ -1.64
PMS1P54277 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.81□□□□□ -1.64
PMS1P54277 RNU7-152P-201ENST00000458982 64 ntBASIC4.81□□□□□ -1.64
PMS1P54277 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.81□□□□□ -1.64
PMS1P54277 Y_RNA.711-201ENST00000516993 102 ntBASIC4.81□□□□□ -1.64
PMS1P54277 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.81□□□□□ -1.64
PMS1P54277 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.81□□□□□ -1.64
PMS1P54277 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.81□□□□□ -1.64
PMS1P54277 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.81□□□□□ -1.64
PMS1P54277 AC138761.3-201ENST00000579993 334 ntBASIC4.81□□□□□ -1.64
PMS1P54277 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.81□□□□□ -1.64
PMS1P54277 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PMS1P54277 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.81□□□□□ -1.64
PMS1P54277 AC079587.1-201ENST00000603846 277 ntBASIC4.81□□□□□ -1.64
PMS1P54277 AL354984.3-201ENST00000604803 325 ntBASIC4.81□□□□□ -1.64
PMS1P54277 AC009570.1-201ENST00000609599 745 ntBASIC4.81□□□□□ -1.64
PMS1P54277 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.81□□□□□ -1.64
PMS1P54277 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.81□□□□□ -1.64
PMS1P54277 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PMS1P54277 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.81□□□□□ -1.64
PMS1P54277 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PMS1P54277 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.8□□□□□ -1.64
PMS1P54277 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PMS1P54277 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PMS1P54277 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PMS1P54277 MAPK10-286ENST00000641208 8747 ntBASIC4.8□□□□□ -1.64
PMS1P54277 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PMS1P54277 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PMS1P54277 RNU6-356P-201ENST00000384140 107 ntBASIC4.8□□□□□ -1.64
PMS1P54277 RNU6-190P-201ENST00000384154 102 ntBASIC4.8□□□□□ -1.64
PMS1P54277 RNU6-1160P-201ENST00000384546 104 ntBASIC4.8□□□□□ -1.64
PMS1P54277 MIR3065-201ENST00000390137 79 ntBASIC4.8□□□□□ -1.64
PMS1P54277 SNORD70.1-201ENST00000391007 85 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms