Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CR848007.1-201ENST00000442354 1699 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.41□□□□□ -2.02
CX3CR1P49238 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CX3CR1P49238 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.41□□□□□ -2.02
CX3CR1P49238 SNORD46.1-201ENST00000364139 104 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 RNU6-1078P-201ENST00000364522 103 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 SET-203ENST00000372688 801 ntTSL 2 BASIC2.41□□□□□ -2.02
CX3CR1P49238 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
CX3CR1P49238 RNU1-109P-201ENST00000383960 147 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 RNU6-637P-201ENST00000384050 107 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 U3.20-201ENST00000390909 217 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 SNORA48.5-201ENST00000391143 135 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 ERHP2-201ENST00000402323 299 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.41□□□□□ -2.02
CX3CR1P49238 TIMM9P2-201ENST00000419324 266 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 BNIP3P2-201ENST00000441221 577 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 CBWD4P-201ENST00000445695 655 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.41□□□□□ -2.02
CX3CR1P49238 AP1S2P1-201ENST00000457344 379 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 AP001025.2-201ENST00000490908 477 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 AC134050.1-201ENST00000495088 933 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 UBE2V1P12-201ENST00000503954 474 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 SNORA74D-201ENST00000516404 141 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 RN7SKP40-201ENST00000517211 242 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.41□□□□□ -2.02
CX3CR1P49238 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.41□□□□□ -2.02
CX3CR1P49238 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.41□□□□□ -2.02
CX3CR1P49238 OR6C7P-201ENST00000547875 934 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.41□□□□□ -2.02
CX3CR1P49238 AC005951.2-201ENST00000576282 495 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 AC090616.3-201ENST00000582184 217 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 MIR4325-201ENST00000583049 90 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 MIR5195-201ENST00000583555 115 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.41□□□□□ -2.02
CX3CR1P49238 AC008277.2-201ENST00000605196 797 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 RPL23AP88-201ENST00000605759 454 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 AC024560.3-201ENST00000608482 349 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 AC107075.1-201ENST00000613695 314 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.41□□□□□ -2.02
CX3CR1P49238 AP003399.1-201ENST00000637534 361 ntBASIC2.41□□□□□ -2.02
CX3CR1P49238 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.4□□□□□ -2.02
CX3CR1P49238 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.02
CX3CR1P49238 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
CX3CR1P49238 RNU6-97P-201ENST00000363387 104 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.4□□□□□ -2.03
CX3CR1P49238 MTND4P13-201ENST00000402078 1023 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 RPS3AP37-201ENST00000419176 745 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 AC091390.3-201ENST00000426478 338 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 AL451062.2-201ENST00000427515 271 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 AL139132.1-201ENST00000431587 344 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 GTF2IP20-201ENST00000431663 360 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.4□□□□□ -2.03
CX3CR1P49238 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.4□□□□□ -2.03
CX3CR1P49238 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.4□□□□□ -2.03
CX3CR1P49238 CYCSP32-201ENST00000440548 321 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 MRPL50P4-201ENST00000446432 475 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 ST13P20-201ENST00000447996 1065 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 RSL24D1P3-201ENST00000449255 495 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.4□□□□□ -2.03
CX3CR1P49238 RPS20P20-201ENST00000460498 340 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.4□□□□□ -2.03
CX3CR1P49238 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.4□□□□□ -2.03
CX3CR1P49238 SUMO2P6-201ENST00000505273 288 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 MRPS36P2-201ENST00000512569 299 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 MTATP6P9-201ENST00000515039 680 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 RNU6-840P-201ENST00000517275 65 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.4□□□□□ -2.03
CX3CR1P49238 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.4□□□□□ -2.03
CX3CR1P49238 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
CX3CR1P49238 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CX3CR1P49238 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CX3CR1P49238 GLYCAM1-201ENST00000546596 285 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 TRAV28-201ENST00000557548 323 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 MTCYBP23-201ENST00000558717 1102 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.4□□□□□ -2.03
CX3CR1P49238 RPL23AP84-201ENST00000571193 464 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 OR1M4P-201ENST00000589199 287 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.4□□□□□ -2.03
CX3CR1P49238 AL392048.1-201ENST00000613946 534 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.4□□□□□ -2.03
CX3CR1P49238 MIR4275-201ENST00000636486 87 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.4□□□□□ -2.03
CX3CR1P49238 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.4□□□□□ -2.03
CX3CR1P49238 AC080100.1-201ENST00000624239 5356 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.39□□□□□ -2.03
CX3CR1P49238 AC073346.2-201ENST00000624724 2058 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CX3CR1P49238 AL161781.1-201ENST00000354277 403 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 RNU6-359P-201ENST00000365466 108 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 RNU6-1207P-201ENST00000384343 107 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 RNU2-25P-201ENST00000411041 191 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.39□□□□□ -2.03
CX3CR1P49238 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.39□□□□□ -2.03
CX3CR1P49238 AL358075.3-201ENST00000426289 226 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.39□□□□□ -2.03
CX3CR1P49238 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.39□□□□□ -2.03
CX3CR1P49238 AC007919.1-201ENST00000429380 217 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 AC092427.1-202ENST00000430569 476 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.39□□□□□ -2.03
CX3CR1P49238 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms