Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RNA5SP34-201ENST00000516887 130 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA4P43681 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.11□□□□□ -1.59
CHRNA4P43681 AC093023.1-201ENST00000547375 507 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 AC027288.2-201ENST00000553028 243 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.11□□□□□ -1.59
CHRNA4P43681 AMZ2P1-203ENST00000565833 850 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 MIR3691-201ENST00000578066 90 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA4P43681 AC005520.5-201ENST00000613926 164 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA4P43681 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA4P43681 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA4P43681 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA4P43681 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA4P43681 C4BPAP1-201ENST00000415474 1893 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CHRNA4P43681 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA4P43681 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA4P43681 AL592148.3-201ENST00000608771 2646 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA4P43681 SNURFL-201ENST00000309296 343 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 AC138393.1-203ENST00000327086 343 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 RNU6-1255P-201ENST00000363434 112 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 Y_RNA.292-201ENST00000364904 97 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.1□□□□□ -1.59
CHRNA4P43681 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA4P43681 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.1□□□□□ -1.59
CHRNA4P43681 AC007098.1-201ENST00000420122 367 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.1□□□□□ -1.59
CHRNA4P43681 MTND3P9-201ENST00000429526 346 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 AC092423.1-201ENST00000430165 186 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 AC005094.1-201ENST00000440420 368 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 SNORD121B-201ENST00000458838 81 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA4P43681 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.1□□□□□ -1.59
CHRNA4P43681 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.1□□□□□ -1.59
CHRNA4P43681 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA4P43681 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.1□□□□□ -1.59
CHRNA4P43681 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA4P43681 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.1□□□□□ -1.59
CHRNA4P43681 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.1□□□□□ -1.59
CHRNA4P43681 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA4P43681 RNU6-844P-201ENST00000517175 102 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 CDH12P4-201ENST00000517835 295 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 AC109479.2-201ENST00000517842 174 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 CDH12P3-201ENST00000517935 295 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 CDH12P1-201ENST00000518435 295 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.1□□□□□ -1.59
CHRNA4P43681 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.1□□□□□ -1.59
CHRNA4P43681 OR10G5P-201ENST00000532733 358 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.1□□□□□ -1.59
CHRNA4P43681 AC006349.1-201ENST00000555526 235 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 MIR4700-201ENST00000578311 74 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.1□□□□□ -1.59
CHRNA4P43681 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.1□□□□□ -1.59
CHRNA4P43681 AC105254.2-201ENST00000603636 436 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 AC008962.1-201ENST00000605729 304 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 AL591516.1-201ENST00000611326 274 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.1□□□□□ -1.59
CHRNA4P43681 AL591926.8-201ENST00000616876 211 ntBASIC5.1□□□□□ -1.59
CHRNA4P43681 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.1□□□□□ -1.59
CHRNA4P43681 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CHRNA4P43681 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA4P43681 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.1□□□□□ -1.59
CHRNA4P43681 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CHRNA4P43681 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CHRNA4P43681 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.1□□□□□ -1.59
CHRNA4P43681 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.1□□□□□ -1.59
CHRNA4P43681 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.1□□□□□ -1.59
CHRNA4P43681 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA4P43681 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.09□□□□□ -1.59
CHRNA4P43681 RBBP8P1-201ENST00000449447 1844 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.09□□□□□ -1.59
CHRNA4P43681 SCARNA15-201ENST00000607520 4325 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
CHRNA4P43681 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHRNA4P43681 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
CHRNA4P43681 XIAPP3-201ENST00000312918 795 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 Y_RNA.44-201ENST00000362676 108 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 U8.4-201ENST00000363626 134 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHRNA4P43681 Y_RNA.441-201ENST00000384123 112 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 RPS4XP7-201ENST00000406274 780 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 RNA5SP107-201ENST00000411358 122 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.09□□□□□ -1.59
CHRNA4P43681 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.09□□□□□ -1.59
CHRNA4P43681 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.09□□□□□ -1.59
CHRNA4P43681 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.09□□□□□ -1.59
CHRNA4P43681 RPL23AP38-201ENST00000423801 469 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 RPS27P18-201ENST00000431701 247 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 IGHV5-78-201ENST00000450948 295 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.09□□□□□ -1.59
CHRNA4P43681 AC097484.1-201ENST00000471148 389 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 AP000926.1-201ENST00000479573 241 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.09□□□□□ -1.59
CHRNA4P43681 ACA59.1-201ENST00000515966 143 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 SNORD116-28-201ENST00000516123 91 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms