Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 BX323014.1-201ENST00000412876 237 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 Z99755.1-201ENST00000414048 380 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 RPL23AP39-201ENST00000415533 405 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 SPA17P1-201ENST00000416656 452 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.29□□□□□ -1.88
HNF4AP41235 ZNF885P-201ENST00000420174 1098 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 ZYG11AP1-201ENST00000430329 837 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 RPL23AP69-201ENST00000431134 458 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.29□□□□□ -1.88
HNF4AP41235 LSM1P1-201ENST00000438629 273 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.29□□□□□ -1.88
HNF4AP41235 AC092641.1-201ENST00000440229 772 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 RPL23AP58-201ENST00000440453 469 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 MTND1P30-201ENST00000441241 901 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 EPS15P1-201ENST00000448836 336 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 AC125238.1-201ENST00000448842 249 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.29□□□□□ -1.88
HNF4AP41235 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.29□□□□□ -1.88
HNF4AP41235 AC021382.1-201ENST00000483523 359 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 AP002812.1-201ENST00000495378 474 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.29□□□□□ -1.88
HNF4AP41235 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.29□□□□□ -1.88
HNF4AP41235 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.29□□□□□ -1.88
HNF4AP41235 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.29□□□□□ -1.88
HNF4AP41235 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.29□□□□□ -1.88
HNF4AP41235 FCF1P8-201ENST00000510322 597 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 AC024589.1-201ENST00000512207 263 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 AC091965.2-201ENST00000512324 613 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.29□□□□□ -1.88
HNF4AP41235 RNU6-1256P-201ENST00000516539 103 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 RN7SKP282-201ENST00000516824 299 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.29□□□□□ -1.88
HNF4AP41235 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.29□□□□□ -1.88
HNF4AP41235 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.29□□□□□ -1.88
HNF4AP41235 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.29□□□□□ -1.88
HNF4AP41235 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.29□□□□□ -1.88
HNF4AP41235 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.29□□□□□ -1.88
HNF4AP41235 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.29□□□□□ -1.88
HNF4AP41235 TRAV37-201ENST00000553906 342 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.29□□□□□ -1.88
HNF4AP41235 RPL23AP84-201ENST00000571193 464 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 AC136618.2-201ENST00000575091 400 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 RSL24D1P11-201ENST00000591045 491 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 AL161629.2-201ENST00000615347 275 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 MIR7844-201ENST00000616161 122 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.29□□□□□ -1.88
HNF4AP41235 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HNF4AP41235 AC244258.1-201ENST00000637553 1071 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 OR4G2P-202ENST00000641004 1759 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HNF4AP41235 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HNF4AP41235 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 AC010680.1-201ENST00000590024 3590 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 AC092104.1-201ENST00000497346 1441 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HNF4AP41235 RNA5SP197-201ENST00000363357 119 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 RNU5E-8P-201ENST00000363502 116 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 Y_RNA.194-201ENST00000363985 102 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 RNU6-723P-201ENST00000383973 107 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 RNU6-637P-201ENST00000384050 107 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 Y_RNA.548-201ENST00000384656 105 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 MIR490-201ENST00000384865 128 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 AC093578.1-201ENST00000415219 368 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.28□□□□□ -1.88
HNF4AP41235 AC008850.1-201ENST00000427546 362 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 MTCO3P5-201ENST00000433620 714 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 AL512844.2-201ENST00000433990 593 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.28□□□□□ -1.88
HNF4AP41235 AL353706.1-201ENST00000436728 494 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.28□□□□□ -1.88
HNF4AP41235 AL512286.1-201ENST00000439244 400 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HNF4AP41235 CYCSP35-201ENST00000451978 304 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 MEMO1P3-201ENST00000459811 302 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 AC010424.1-201ENST00000506336 297 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 Y_RNA.695-201ENST00000516715 107 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 MIR2276-201ENST00000516886 89 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 SNORA31.21-201ENST00000517180 77 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.28□□□□□ -1.88
HNF4AP41235 AC087276.1-201ENST00000529659 480 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.28□□□□□ -1.88
HNF4AP41235 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.28□□□□□ -1.88
HNF4AP41235 AC007458.1-201ENST00000542812 373 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.28□□□□□ -1.88
HNF4AP41235 AC004024.1-201ENST00000549244 247 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.28□□□□□ -1.88
HNF4AP41235 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.28□□□□□ -1.88
HNF4AP41235 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.28□□□□□ -1.88
HNF4AP41235 AC008507.1-201ENST00000587506 734 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 AC067852.3-201ENST00000589177 561 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.28□□□□□ -1.88
HNF4AP41235 U73023.1-201ENST00000603134 700 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 AC107214.2-201ENST00000608204 634 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 AC103591.3-201ENST00000608684 209 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 AC107294.3-201ENST00000609211 526 ntBASIC3.28□□□□□ -1.88
HNF4AP41235 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.28□□□□□ -1.88
HNF4AP41235 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms