Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC003989.2-201ENST00000440224 169 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 AL034418.1-201ENST00000448675 860 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
SCN4AP35499 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.4□□□□□ -2.03
SCN4AP35499 TRMT112P2-201ENST00000512910 132 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.4□□□□□ -2.03
SCN4AP35499 RNU6-488P-201ENST00000515918 99 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 AC104417.1-201ENST00000523974 751 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.4□□□□□ -2.03
SCN4AP35499 MTCYBP27-201ENST00000555160 670 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.4□□□□□ -2.03
SCN4AP35499 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.4□□□□□ -2.03
SCN4AP35499 LLPHP1-201ENST00000603571 367 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 AC113194.1-201ENST00000606037 500 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 AC092574.1-201ENST00000609771 420 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 AL512427.1-201ENST00000618593 349 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 AL109620.1-201ENST00000618738 1197 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 AC092650.2-201ENST00000619984 902 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
SCN4AP35499 AC009269.6-201ENST00000621778 588 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 AC090617.7-201ENST00000623952 126 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 AC091953.2-201ENST00000623979 160 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SCN4AP35499 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SCN4AP35499 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.39□□□□□ -2.03
SCN4AP35499 RNU6-661P-201ENST00000362409 107 ntBASIC2.39□□□□□ -2.03
SCN4AP35499 RNU6-730P-201ENST00000383954 104 ntBASIC2.39□□□□□ -2.03
SCN4AP35499 AC092638.1-201ENST00000411966 1275 ntBASIC2.39□□□□□ -2.03
SCN4AP35499 AC241520.1-201ENST00000422654 1099 ntBASIC2.39□□□□□ -2.03
SCN4AP35499 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.39□□□□□ -2.03
SCN4AP35499 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.39□□□□□ -2.03
SCN4AP35499 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.39□□□□□ -2.03
SCN4AP35499 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.39□□□□□ -2.03
SCN4AP35499 RNU7-140P-201ENST00000459546 60 ntBASIC2.39□□□□□ -2.03
SCN4AP35499 MLLT10P2-201ENST00000506434 249 ntBASIC2.39□□□□□ -2.03
SCN4AP35499 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.39□□□□□ -2.03
SCN4AP35499 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SCN4AP35499 AP000790.1-201ENST00000528891 737 ntBASIC2.39□□□□□ -2.03
SCN4AP35499 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.39□□□□□ -2.03
SCN4AP35499 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.39□□□□□ -2.03
SCN4AP35499 MIR4448-201ENST00000584360 86 ntBASIC2.39□□□□□ -2.03
SCN4AP35499 GAS5-AS1-201ENST00000602767 694 ntBASIC2.39□□□□□ -2.03
SCN4AP35499 AL445435.1-201ENST00000604232 665 ntBASIC2.39□□□□□ -2.03
SCN4AP35499 AL138955.1-201ENST00000622881 1040 ntBASIC2.39□□□□□ -2.03
SCN4AP35499 AC087821.2-201ENST00000637086 450 ntBASIC2.39□□□□□ -2.03
SCN4AP35499 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.39□□□□□ -2.03
SCN4AP35499 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SCN4AP35499 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SCN4AP35499 RPL21P75-201ENST00000396599 483 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 AP002784.2-201ENST00000397300 549 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 RPL21P28-201ENST00000401418 483 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 AL121978.1-201ENST00000402778 359 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 AL592114.1-201ENST00000403842 483 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 MTCYBP24-201ENST00000420387 1106 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.38□□□□□ -2.03
SCN4AP35499 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.38□□□□□ -2.03
SCN4AP35499 AC241584.1-201ENST00000438469 1241 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.38□□□□□ -2.03
SCN4AP35499 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.38□□□□□ -2.03
SCN4AP35499 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.38□□□□□ -2.03
SCN4AP35499 AC011979.1-201ENST00000472300 483 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 RPL21P93-201ENST00000480465 489 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.38□□□□□ -2.03
SCN4AP35499 AC233702.1-201ENST00000482905 502 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 AC093591.1-201ENST00000491435 481 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 RPL21P16-201ENST00000495531 483 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 AC078918.1-201ENST00000498515 228 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 AC084024.2-201ENST00000503480 791 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 SNORA31.11-201ENST00000516528 139 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 snoZ278.1-201ENST00000517059 112 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 RNU6-1028P-201ENST00000517164 93 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 IGKV2D-36-201ENST00000518643 226 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 IGJP1-201ENST00000522682 475 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 HSPE1P20-201ENST00000538133 289 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 MIR4666A-201ENST00000580160 79 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 AC013468.1-201ENST00000608680 598 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.38□□□□□ -2.03
SCN4AP35499 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SCN4AP35499 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.38□□□□□ -2.03
SCN4AP35499 RNU6-1243P-201ENST00000364028 107 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 MTCO1P56-201ENST00000401674 224 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 AL021407.1-201ENST00000404531 386 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 AP000275.1-201ENST00000411943 390 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 AC005005.2-201ENST00000420779 380 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 AC092473.1-201ENST00000441098 221 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 RPS26P56-201ENST00000444468 240 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 AC009237.8-201ENST00000445492 379 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 MTCO3P2-201ENST00000457365 171 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 AC068781.1-201ENST00000488231 618 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SCN4AP35499 RNU6-27P-201ENST00000516146 107 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 RNU2-58P-201ENST00000516403 183 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.38□□□□□ -2.03
SCN4AP35499 SETP2-201ENST00000553886 926 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.38□□□□□ -2.03
SCN4AP35499 AC107954.1-201ENST00000565906 727 ntBASIC2.38□□□□□ -2.03
SCN4AP35499 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.38□□□□□ -2.03
SCN4AP35499 RN7SL622P-201ENST00000585292 275 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms