Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CD40LGP29965 HMGB1P5-201ENST00000255320 642 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CD40LGP29965 RNU4-52P-201ENST00000384209 138 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 MIR196B-201ENST00000384852 84 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 NDUFB4P4-201ENST00000404822 243 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 RNU2-28P-201ENST00000410457 189 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.13□□□□□ -2.07
CD40LGP29965 SFR1P2-201ENST00000421841 730 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.13□□□□□ -2.07
CD40LGP29965 AC091390.3-201ENST00000426478 338 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.13□□□□□ -2.07
CD40LGP29965 AC234064.1-201ENST00000436312 247 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.13□□□□□ -2.07
CD40LGP29965 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.13□□□□□ -2.07
CD40LGP29965 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.13□□□□□ -2.07
CD40LGP29965 RPS29P26-201ENST00000477483 171 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.13□□□□□ -2.07
CD40LGP29965 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.13□□□□□ -2.07
CD40LGP29965 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.13□□□□□ -2.07
CD40LGP29965 AC025755.1-201ENST00000521306 278 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.13□□□□□ -2.07
CD40LGP29965 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.13□□□□□ -2.07
CD40LGP29965 MIR5571-201ENST00000577998 113 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 BNIP3P24-201ENST00000593398 557 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 AC067747.1-201ENST00000608026 250 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 AC107214.2-201ENST00000608204 634 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.13□□□□□ -2.07
CD40LGP29965 AC068057.2-201ENST00000624047 895 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 AL160394.1-201ENST00000624765 724 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.13□□□□□ -2.07
CD40LGP29965 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.13□□□□□ -2.07
CD40LGP29965 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
CD40LGP29965 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.13□□□□□ -2.07
CD40LGP29965 OR4G2P-202ENST00000641004 1759 ntBASIC2.13□□□□□ -2.07
CD40LGP29965 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.12□□□□□ -2.07
CD40LGP29965 RNU6-859P-201ENST00000362728 107 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 SNORA5B-201ENST00000363786 132 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 SNORD114-30-201ENST00000364448 72 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 RNU6-657P-201ENST00000383904 107 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 SNORA36C-201ENST00000384289 132 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 AL356057.3-201ENST00000402607 340 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 AL133264.1-201ENST00000407157 562 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 BOLA3P4-201ENST00000418151 400 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 AC019178.2-201ENST00000423595 505 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 AC019097.1-201ENST00000424783 735 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 AC063976.3-201ENST00000426849 329 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 AL135938.1-201ENST00000443141 297 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 OSTCP8-201ENST00000445117 448 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.12□□□□□ -2.07
CD40LGP29965 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.12□□□□□ -2.07
CD40LGP29965 AC013828.1-201ENST00000481845 158 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 RPS27P21-201ENST00000486977 252 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.12□□□□□ -2.07
CD40LGP29965 AP003066.2-201ENST00000529375 555 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 AC243972.3-201ENST00000539655 198 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.12□□□□□ -2.07
CD40LGP29965 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.12□□□□□ -2.07
CD40LGP29965 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.12□□□□□ -2.07
CD40LGP29965 SNORD53-201ENST00000579969 78 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 KATNBL1P5-201ENST00000605015 517 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 AL450336.1-201ENST00000605180 586 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CD40LGP29965 MIR6130-201ENST00000619419 109 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 U4.3-201ENST00000621047 82 ntBASIC2.12□□□□□ -2.07
CD40LGP29965 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.12□□□□□ -2.07
CD40LGP29965 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CD40LGP29965 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.12□□□□□ -2.07
CD40LGP29965 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.12□□□□□ -2.07
CD40LGP29965 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.11□□□□□ -2.07
CD40LGP29965 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CD40LGP29965 OR56A5-201ENST00000340110 738 ntBASIC2.11□□□□□ -2.07
CD40LGP29965 RNU1-112P-201ENST00000364401 164 ntBASIC2.11□□□□□ -2.07
CD40LGP29965 RNA5SP338-201ENST00000410495 85 ntBASIC2.11□□□□□ -2.07
CD40LGP29965 AL592148.1-201ENST00000413568 445 ntBASIC2.11□□□□□ -2.07
CD40LGP29965 AL445183.3-201ENST00000414168 502 ntBASIC2.11□□□□□ -2.07
CD40LGP29965 OR4K6P-201ENST00000416478 897 ntBASIC2.11□□□□□ -2.07
CD40LGP29965 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.11□□□□□ -2.07
CD40LGP29965 HMGN2P38-201ENST00000423806 265 ntBASIC2.11□□□□□ -2.07
CD40LGP29965 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.11□□□□□ -2.07
CD40LGP29965 SRIP2-201ENST00000428470 166 ntBASIC2.11□□□□□ -2.07
CD40LGP29965 HMGB1P9-201ENST00000429856 646 ntBASIC2.11□□□□□ -2.07
CD40LGP29965 AC236972.1-201ENST00000433225 199 ntBASIC2.11□□□□□ -2.07
CD40LGP29965 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.11□□□□□ -2.07
CD40LGP29965 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.11□□□□□ -2.07
CD40LGP29965 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CD40LGP29965 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.11□□□□□ -2.07
CD40LGP29965 GTF3AP2-201ENST00000557014 266 ntBASIC2.11□□□□□ -2.07
CD40LGP29965 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.11□□□□□ -2.07
CD40LGP29965 OR2AS2P-201ENST00000606902 342 ntBASIC2.11□□□□□ -2.07
CD40LGP29965 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.11□□□□□ -2.07
CD40LGP29965 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.11□□□□□ -2.07
CD40LGP29965 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.11□□□□□ -2.07
CD40LGP29965 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.11□□□□□ -2.07
CD40LGP29965 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
CD40LGP29965 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CD40LGP29965 HSPE1P11-201ENST00000339579 310 ntBASIC2.1□□□□□ -2.07
CD40LGP29965 RNU6-741P-201ENST00000383889 107 ntBASIC2.1□□□□□ -2.07
CD40LGP29965 SNORA18.3-201ENST00000384122 132 ntBASIC2.1□□□□□ -2.07
CD40LGP29965 AP002784.2-201ENST00000397300 549 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms