| TFE3 | P19532 | Y_RNA.5-201 | ENST00000362334 | 102 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | RNU1-83P-201 | ENST00000363426 | 164 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | OR51A4-201 | ENST00000380373 | 1002 nt | APPRIS P1 BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | LY6G5C-210 | ENST00000383237 | 674 nt | APPRIS P2 TSL 1 (best) BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | RNU6-1032P-201 | ENST00000384100 | 107 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | RNU6-890P-201 | ENST00000384121 | 107 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | SNORA75.6-201 | ENST00000391318 | 127 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC016769.2-201 | ENST00000414815 | 475 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | BX510359.2-201 | ENST00000417920 | 305 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC007349.1-201 | ENST00000419326 | 587 nt | TSL 4 BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | BX842559.1-201 | ENST00000419615 | 532 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | LINC01344-201 | ENST00000420760 | 261 nt | TSL 3 BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | MTCYBP10-201 | ENST00000424905 | 650 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | MTATP6P4-201 | ENST00000427725 | 675 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC098484.1-201 | ENST00000447572 | 484 nt | TSL 3 BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | RPL21P41-201 | ENST00000459863 | 264 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AL033397.2-201 | ENST00000508884 | 547 nt | TSL 2 BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC021146.3-201 | ENST00000511911 | 260 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC026782.1-201 | ENST00000512952 | 449 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | SDHAF2-203 | ENST00000534878 | 523 nt | TSL 2 BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | LINC02327-203 | ENST00000550122 | 738 nt | TSL 2 BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AL133166.1-202 | ENST00000550975 | 565 nt | TSL 4 BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AL359237.1-202 | ENST00000556168 | 487 nt | TSL 5 BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AGBL1-AS1-203 | ENST00000566878 | 865 nt | TSL 3 BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | RN7SL652P-201 | ENST00000577769 | 300 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC003973.1-201 | ENST00000600071 | 546 nt | TSL 4 BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | MIR15A-201 | ENST00000607334 | 83 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC010205.1-201 | ENST00000616668 | 449 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC105265.4-201 | ENST00000618391 | 306 nt | TSL 5 BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | HOXA11-AS1_4.1-201 | ENST00000620901 | 233 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | MIR6730-201 | ENST00000622213 | 67 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC006065.5-201 | ENST00000623427 | 349 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | MUC7-203 | ENST00000456088 | 2479 nt | APPRIS P2 TSL 4 BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC107068.1-201 | ENST00000563286 | 4218 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | GRIK2-204 | ENST00000369137 | 4272 nt | TSL 5 BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | TMEM30A-202 | ENST00000370050 | 3775 nt | TSL 1 (best) BASIC | 4.89 | □□□□□ -1.63 | | |
| TFE3 | P19532 | XIST-204 | ENST00000429829 | 19275 nt | TSL 1 (best) BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | ITGB1-205 | ENST00000423113 | 3729 nt | APPRIS ALT1 TSL 5 BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | SNORD62.1-201 | ENST00000362541 | 86 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | RNU6-1309P-201 | ENST00000363305 | 108 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | RN7SKP103-201 | ENST00000363848 | 320 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | Y_RNA.252-201 | ENST00000364556 | 101 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | LZIC-201 | ENST00000377213 | 945 nt | APPRIS P1 TSL 1 (best) BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | RNU6-196P-201 | ENST00000384315 | 107 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | RNU6-95P-201 | ENST00000384697 | 107 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AL158837.1-201 | ENST00000417644 | 452 nt | TSL 2 BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | MCFD2P1-201 | ENST00000417812 | 300 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC140479.3-201 | ENST00000418944 | 1126 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AL590632.1-201 | ENST00000424289 | 371 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AL360227.1-201 | ENST00000425364 | 433 nt | TSL 3 BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AL445488.1-202 | ENST00000430623 | 545 nt | TSL 3 BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | SNRPEP4-201 | ENST00000435815 | 279 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | HIGD1AP11-201 | ENST00000438361 | 280 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AL160271.1-201 | ENST00000444708 | 829 nt | TSL 3 BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | BTF3P15-201 | ENST00000455606 | 336 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | RNU7-138P-201 | ENST00000459479 | 64 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC087884.1-201 | ENST00000469738 | 328 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AP000926.1-201 | ENST00000479573 | 241 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | RPL36AP41-201 | ENST00000493820 | 306 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | LINC02438-201 | ENST00000505347 | 641 nt | TSL 3 BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | SNORA25.10-201 | ENST00000515926 | 124 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC023034.1-201 | ENST00000558141 | 518 nt | TSL 3 BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC068397.1-201 | ENST00000560337 | 531 nt | TSL 2 BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC015912.2-201 | ENST00000571053 | 181 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AL354984.3-201 | ENST00000604803 | 325 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | DLEU2_5.1-201 | ENST00000615567 | 84 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC243585.1-201 | ENST00000617867 | 607 nt | TSL 3 BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC015967.1-201 | ENST00000619893 | 476 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | CASP1-217 | ENST00000640184 | 327 nt | TSL 1 (best) BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | SDAD1P2-201 | ENST00000441308 | 2028 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | FGF7-202 | ENST00000560270 | 1688 nt | TSL 1 (best) BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | C9orf72-203 | ENST00000380003 | 3200 nt | APPRIS P1 TSL 1 (best) BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | PCDH9-201 | ENST00000377861 | 28227 nt | TSL 1 (best) BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | EBAG9-210 | ENST00000620557 | 2186 nt | APPRIS P1 TSL 3 BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | LINGO2-201 | ENST00000308675 | 3031 nt | APPRIS P1 TSL 5 BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC009812.4-201 | ENST00000569134 | 1805 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| TFE3 | P19532 | CYLD-212 | ENST00000568704 | 3292 nt | TSL 5 BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | SOCS5-201 | ENST00000306503 | 4771 nt | APPRIS P1 TSL 1 (best) BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | C12orf60-201 | ENST00000330828 | 1684 nt | APPRIS P1 TSL 1 (best) BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | ZNF28-204 | ENST00000457749 | 4556 nt | APPRIS P1 TSL 1 (best) BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | ZNF382-204 | ENST00000439428 | 2742 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | ZNF415-201 | ENST00000243643 | 2270 nt | APPRIS P3 TSL 1 (best) BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | GRIK2-201 | ENST00000318991 | 4317 nt | TSL 5 BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | RNU6-266P-201 | ENST00000364225 | 107 nt | BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | RNVU1-6-201 | ENST00000364688 | 164 nt | BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | C1orf54-201 | ENST00000369098 | 418 nt | TSL 1 (best) BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | BPY2-202 | ENST00000382585 | 321 nt | APPRIS P5 TSL 1 (best) BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | SNORA36C-201 | ENST00000384289 | 132 nt | BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | MRPL42P3-201 | ENST00000401492 | 326 nt | BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AP000580.1-201 | ENST00000404439 | 358 nt | BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | RNU6-985P-201 | ENST00000410182 | 104 nt | BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | Y_RNA.594-201 | ENST00000410373 | 140 nt | BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AL590783.1-201 | ENST00000424138 | 456 nt | TSL 2 BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | UBE2V1P4-201 | ENST00000425374 | 344 nt | BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC236972.1-201 | ENST00000433225 | 199 nt | BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AL645568.3-201 | ENST00000433683 | 316 nt | BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC012442.1-201 | ENST00000436885 | 529 nt | TSL 4 BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC016831.4-201 | ENST00000438302 | 307 nt | BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | RPL26P6-201 | ENST00000440913 | 438 nt | BASIC | 4.87 | □□□□□ -1.63 | | |
| TFE3 | P19532 | AC091153.2-202 | ENST00000441700 | 384 nt | TSL 3 BASIC | 4.87 | □□□□□ -1.63 | | |