Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.31□□□□□ -1.56
ERCC3P19447 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.31□□□□□ -1.56
ERCC3P19447 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.31□□□□□ -1.56
ERCC3P19447 MIR3921-201ENST00000577308 85 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 MIR3160-1-201ENST00000577972 85 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 MIR3138-201ENST00000585238 82 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 AC106900.2-201ENST00000604994 317 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 MIR15A-201ENST00000607334 83 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 AC104237.2-201ENST00000612456 443 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.31□□□□□ -1.56
ERCC3P19447 AP003400.5-201ENST00000624827 617 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 MIR1302-1-201ENST00000637932 143 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC3P19447 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.3□□□□□ -1.56
ERCC3P19447 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ERCC3P19447 AC018529.3-201ENST00000624212 2254 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ERCC3P19447 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
ERCC3P19447 RNA5SP515-201ENST00000364570 118 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 RNA5SP189-201ENST00000364920 115 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 RNU6-715P-201ENST00000365204 103 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 RNU6-1013P-201ENST00000384180 107 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 MIR607-201ENST00000385241 96 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.3□□□□□ -1.56
ERCC3P19447 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.3□□□□□ -1.56
ERCC3P19447 AL160275.3-201ENST00000423876 471 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.3□□□□□ -1.56
ERCC3P19447 AP000873.1-201ENST00000463987 400 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.3□□□□□ -1.56
ERCC3P19447 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.3□□□□□ -1.56
ERCC3P19447 RNU6-189P-201ENST00000516120 101 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 RNU6-927P-201ENST00000516199 100 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.3□□□□□ -1.56
ERCC3P19447 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.3□□□□□ -1.56
ERCC3P19447 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.3□□□□□ -1.56
ERCC3P19447 RNF138P2-201ENST00000603490 592 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 AL592436.1-201ENST00000605135 558 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 Z82243.1-201ENST00000609432 473 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 AL132765.2-201ENST00000610812 351 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 AC034102.8-201ENST00000615146 484 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 AC114781.5-201ENST00000615297 108 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 AL713922.2-201ENST00000619384 716 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 AL512643.1-201ENST00000635735 524 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ERCC3P19447 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ERCC3P19447 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.3□□□□□ -1.56
ERCC3P19447 AP000542.2-201ENST00000623199 6179 ntBASIC5.3□□□□□ -1.56
ERCC3P19447 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.29□□□□□ -1.56
ERCC3P19447 MAPK10-320ENST00000641462 6696 ntBASIC5.29□□□□□ -1.56
ERCC3P19447 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
ERCC3P19447 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ERCC3P19447 Y_RNA.414-201ENST00000384011 101 ntBASIC5.29□□□□□ -1.56
ERCC3P19447 ARL4AP5-201ENST00000404372 599 ntBASIC5.29□□□□□ -1.56
ERCC3P19447 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.29□□□□□ -1.56
ERCC3P19447 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.29□□□□□ -1.56
ERCC3P19447 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.29□□□□□ -1.56
ERCC3P19447 AL592045.1-201ENST00000429867 352 ntBASIC5.29□□□□□ -1.56
ERCC3P19447 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.29□□□□□ -1.56
ERCC3P19447 VDAC1P3-201ENST00000434069 851 ntBASIC5.29□□□□□ -1.56
ERCC3P19447 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ERCC3P19447 AC025164.1-201ENST00000496249 478 ntBASIC5.29□□□□□ -1.56
ERCC3P19447 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
ERCC3P19447 HIGD1AP13-201ENST00000509878 289 ntBASIC5.29□□□□□ -1.56
ERCC3P19447 AC021146.3-201ENST00000511911 260 ntBASIC5.29□□□□□ -1.56
ERCC3P19447 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.29□□□□□ -1.56
ERCC3P19447 SNORA31.3-201ENST00000516029 96 ntBASIC5.29□□□□□ -1.56
ERCC3P19447 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.29□□□□□ -1.56
ERCC3P19447 AC093027.1-201ENST00000546698 429 ntBASIC5.29□□□□□ -1.56
ERCC3P19447 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.29□□□□□ -1.56
ERCC3P19447 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.29□□□□□ -1.56
ERCC3P19447 AC007546.1-201ENST00000619452 559 ntBASIC5.29□□□□□ -1.56
ERCC3P19447 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.29□□□□□ -1.56
ERCC3P19447 AL136164.3-201ENST00000624429 3978 ntBASIC5.29□□□□□ -1.56
ERCC3P19447 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ERCC3P19447 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ERCC3P19447 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
ERCC3P19447 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
ERCC3P19447 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ERCC3P19447 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
ERCC3P19447 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.28□□□□□ -1.56
ERCC3P19447 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
ERCC3P19447 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ERCC3P19447 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ERCC3P19447 RNU6-434P-201ENST00000384376 107 ntBASIC5.28□□□□□ -1.56
ERCC3P19447 MIR1290-201ENST00000408735 78 ntBASIC5.28□□□□□ -1.56
ERCC3P19447 BX682237.1-201ENST00000415016 335 ntBASIC5.28□□□□□ -1.56
ERCC3P19447 EIF4HP2-201ENST00000424380 563 ntBASIC5.28□□□□□ -1.56
ERCC3P19447 CKS1BP6-201ENST00000424932 240 ntBASIC5.28□□□□□ -1.56
ERCC3P19447 AC091390.3-201ENST00000426478 338 ntBASIC5.28□□□□□ -1.56
ERCC3P19447 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.28□□□□□ -1.56
ERCC3P19447 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC3P19447 HMGB1P18-201ENST00000438801 619 ntBASIC5.28□□□□□ -1.56
ERCC3P19447 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.28□□□□□ -1.56
ERCC3P19447 AL121877.1-201ENST00000453704 622 ntBASIC5.28□□□□□ -1.56
ERCC3P19447 FGF7P3-201ENST00000454645 303 ntBASIC5.28□□□□□ -1.56
ERCC3P19447 RN7SL303P-201ENST00000469773 251 ntBASIC5.28□□□□□ -1.56
ERCC3P19447 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC3P19447 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC3P19447 AC005921.1-201ENST00000510589 286 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms