Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RPL30P5-201ENST00000494923 336 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 KCTD9P5-201ENST00000504141 1170 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PDGFRAP16234 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.26□□□□□ -1.89
PDGFRAP16234 RNU6-1129P-201ENST00000515964 104 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 Y_RNA.717-201ENST00000517106 92 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.26□□□□□ -1.89
PDGFRAP16234 CASP1P1-201ENST00000526345 212 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.26□□□□□ -1.89
PDGFRAP16234 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.26□□□□□ -1.89
PDGFRAP16234 ZNF321P-202ENST00000550843 495 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PDGFRAP16234 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.26□□□□□ -1.89
PDGFRAP16234 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.26□□□□□ -1.89
PDGFRAP16234 AP001004.1-201ENST00000582468 324 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 UBL5P2-201ENST00000583788 219 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.26□□□□□ -1.89
PDGFRAP16234 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PDGFRAP16234 AC103710.4-201ENST00000609301 899 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 AC087683.2-201ENST00000611384 326 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 AC013476.2-201ENST00000614456 459 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 AC009159.2-201ENST00000617603 606 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 AL355493.4-201ENST00000618530 292 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 AC099506.2-201ENST00000623074 221 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 AC091965.5-201ENST00000624785 342 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PDGFRAP16234 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.26□□□□□ -1.89
PDGFRAP16234 AL138713.1-201ENST00000624026 2130 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.26□□□□□ -1.89
PDGFRAP16234 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PDGFRAP16234 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PDGFRAP16234 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PDGFRAP16234 MTND4P16-201ENST00000466108 1367 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 MAPK10-322ENST00000641485 4530 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.25□□□□□ -1.89
PDGFRAP16234 CCT4P2-201ENST00000233836 1548 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
PDGFRAP16234 U3.6-201ENST00000363622 211 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 AC007899.1-201ENST00000412776 775 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFRAP16234 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFRAP16234 ATG3P1-201ENST00000419507 911 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 AL593851.1-201ENST00000426171 157 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.25□□□□□ -1.89
PDGFRAP16234 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFRAP16234 TAAR7P-201ENST00000436141 242 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 MTND5P2-201ENST00000442927 1142 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 RPL7P36-201ENST00000444633 681 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 AC009237.8-201ENST00000445492 379 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 TPT1P14-201ENST00000448018 505 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 AL162389.1-201ENST00000449233 177 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 ATG12P2-201ENST00000456830 416 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFRAP16234 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFRAP16234 AC004263.1-201ENST00000479327 332 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 RPS3AP43-201ENST00000479743 781 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 AL049874.1-201ENST00000489560 388 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 OR2A20P-203ENST00000498397 1268 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 AC021146.5-201ENST00000503544 545 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFRAP16234 OR5G4P-201ENST00000525251 760 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.25□□□□□ -1.89
PDGFRAP16234 MTATP6P15-201ENST00000527233 835 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.25□□□□□ -1.89
PDGFRAP16234 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFRAP16234 DNAJC8P1-201ENST00000554535 372 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.25□□□□□ -1.89
PDGFRAP16234 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFRAP16234 RPL23AP84-201ENST00000571193 464 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.25□□□□□ -1.89
PDGFRAP16234 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.25□□□□□ -1.89
PDGFRAP16234 HSPE1P7-201ENST00000604681 321 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 AL139344.1-201ENST00000605228 195 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 TUG1_2.1-201ENST00000614234 87 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 AC140725.3-201ENST00000616193 880 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 AC090617.7-201ENST00000623952 126 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 AC007671.2-201ENST00000637344 619 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 MIR622-201ENST00000638396 96 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDGFRAP16234 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.25□□□□□ -1.89
PDGFRAP16234 OR4G2P-202ENST00000641004 1759 ntBASIC3.25□□□□□ -1.89
PDGFRAP16234 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PDGFRAP16234 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.24□□□□□ -1.89
PDGFRAP16234 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PDGFRAP16234 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PDGFRAP16234 AP000568.1-201ENST00000282964 442 ntBASIC3.24□□□□□ -1.89
PDGFRAP16234 RNY4P24-201ENST00000362735 96 ntBASIC3.24□□□□□ -1.89
PDGFRAP16234 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.24□□□□□ -1.89
PDGFRAP16234 RPL7L1P10-201ENST00000427790 463 ntBASIC3.24□□□□□ -1.89
PDGFRAP16234 AL590383.1-201ENST00000428602 75 ntBASIC3.24□□□□□ -1.89
PDGFRAP16234 RPL23AP69-201ENST00000431134 458 ntBASIC3.24□□□□□ -1.89
PDGFRAP16234 AC092573.2-201ENST00000434546 243 ntBASIC3.24□□□□□ -1.89
PDGFRAP16234 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.24□□□□□ -1.89
PDGFRAP16234 AL831737.1-201ENST00000441288 271 ntBASIC3.24□□□□□ -1.89
PDGFRAP16234 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.24□□□□□ -1.89
PDGFRAP16234 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.24□□□□□ -1.89
PDGFRAP16234 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms