Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AL731566.1-201ENST00000620490 1937 ntBASIC5.27□□□□□ -1.57
HOXD8P13378 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXD8P13378 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD8P13378 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD8P13378 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD8P13378 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
HOXD8P13378 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
HOXD8P13378 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD8P13378 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD8P13378 AC233263.6-201ENST00000631132 1963 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 Y_RNA.60-201ENST00000362831 98 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 RNU6-45P-201ENST00000384471 107 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 RNU6-790P-201ENST00000384479 105 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 AC097374.1-203ENST00000400783 485 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXD8P13378 AC011933.1-201ENST00000413334 321 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXD8P13378 RPL12P34-201ENST00000424532 479 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 AL645568.3-201ENST00000433683 316 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 RPL35AP21-201ENST00000437667 333 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXD8P13378 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXD8P13378 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD8P13378 RPS3AP12-201ENST00000443616 753 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXD8P13378 AL031274.1-201ENST00000450334 232 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 MTCO3P8-201ENST00000453691 755 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 PCMTD1P1-201ENST00000455560 355 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 RNU7-138P-201ENST00000459479 64 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 AC010683.1-201ENST00000473673 378 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 AC011005.2-201ENST00000487324 359 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 AC069499.1-201ENST00000489433 509 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 VN1R104P-201ENST00000505115 1009 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 AC092436.3-201ENST00000511788 257 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 AC069113.1-201ENST00000517763 267 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD8P13378 PARP1P2-201ENST00000556806 195 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 HMGB3P26-201ENST00000560051 582 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 MIR4277-201ENST00000578298 84 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 AC012119.1-201ENST00000603184 222 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD8P13378 HSPA8P4-201ENST00000511877 1920 ntBASIC5.26□□□□□ -1.57
HOXD8P13378 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD8P13378 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD8P13378 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HOXD8P13378 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD8P13378 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HOXD8P13378 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD8P13378 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD8P13378 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXD8P13378 GVINP1-202ENST00000531871 7271 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD8P13378 Y_RNA.117-201ENST00000363294 101 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 RNA5SP447-201ENST00000363749 119 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 RNU6-1062P-201ENST00000383908 107 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 RNU6-472P-201ENST00000384299 107 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HOXD8P13378 RNU2-38P-201ENST00000410856 79 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 RNU2-64P-201ENST00000411315 191 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXD8P13378 MTND5P15-201ENST00000434246 349 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 HSFY6P-201ENST00000445573 403 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 GAPDHP27-201ENST00000447427 1020 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 snoU109.4-201ENST00000458953 143 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXD8P13378 HMGB1P35-201ENST00000503360 598 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.25□□□□□ -1.57
HOXD8P13378 AC007016.1-201ENST00000512110 244 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXD8P13378 RN7SKP122-201ENST00000515923 296 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 Y_RNA.680-201ENST00000516441 93 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 RN7SKP277-201ENST00000516895 283 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXD8P13378 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXD8P13378 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXD8P13378 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXD8P13378 AC174048.1-201ENST00000603389 144 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 ELOCP5-201ENST00000604924 333 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXD8P13378 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD8P13378 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD8P13378 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HOXD8P13378 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD8P13378 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
HOXD8P13378 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXD8P13378 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD8P13378 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 ZNF137P-201ENST00000456718 1920 ntBASIC5.25□□□□□ -1.57
HOXD8P13378 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXD8P13378 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
HOXD8P13378 OR14L1P-202ENST00000641545 3009 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD8P13378 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXD8P13378 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD8P13378 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXD8P13378 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HOXD8P13378 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HOXD8P13378 OR56A5-201ENST00000340110 738 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 Y_RNA.126-201ENST00000363382 111 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 RNU6-821P-201ENST00000390995 107 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms