Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.97□□□□□ -2.09
COL1A1P02452 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.97□□□□□ -2.09
COL1A1P02452 ARL2BPP2-201ENST00000550907 489 ntBASIC1.97□□□□□ -2.09
COL1A1P02452 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.97□□□□□ -2.09
COL1A1P02452 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.97□□□□□ -2.09
COL1A1P02452 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.97□□□□□ -2.09
COL1A1P02452 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.97□□□□□ -2.09
COL1A1P02452 MIR4452-201ENST00000583004 71 ntBASIC1.97□□□□□ -2.09
COL1A1P02452 GLUD1P4-201ENST00000590914 418 ntBASIC1.97□□□□□ -2.09
COL1A1P02452 AC126118.1-201ENST00000607744 628 ntBASIC1.97□□□□□ -2.09
COL1A1P02452 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.97□□□□□ -2.09
COL1A1P02452 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COL1A1P02452 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.96□□□□□ -2.1
COL1A1P02452 RNU6-1-201ENST00000383898 107 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 RNU6-42P-201ENST00000384165 107 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 RNU6-36P-201ENST00000384172 107 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 RNU6-4P-201ENST00000384205 107 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 RNU6-5P-201ENST00000384238 107 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 RNU6-3P-201ENST00000384314 107 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 RNU6-2-201ENST00000384627 107 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 RNU6-9-201ENST00000384776 107 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 RNU6-33P-201ENST00000384793 107 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.96□□□□□ -2.1
COL1A1P02452 SUMO1P4-201ENST00000429430 302 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 MTCYBP34-201ENST00000439552 670 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.96□□□□□ -2.1
COL1A1P02452 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.96□□□□□ -2.1
COL1A1P02452 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.96□□□□□ -2.1
COL1A1P02452 TOMM22P6-201ENST00000465035 409 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 AC107398.1-201ENST00000486904 505 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 AC079203.1-201ENST00000487972 404 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.96□□□□□ -2.1
COL1A1P02452 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.96□□□□□ -2.1
COL1A1P02452 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COL1A1P02452 ACTR3BP3-201ENST00000565577 979 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 AC245036.5-201ENST00000596330 847 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.96□□□□□ -2.1
COL1A1P02452 RNU6-6P-201ENST00000606623 107 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 AC012360.2-201ENST00000609349 391 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 AC140725.3-201ENST00000616193 880 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 AC018755.4-201ENST00000619715 454 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
COL1A1P02452 AC009950.2-201ENST00000636548 183 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 MTND5P35-201ENST00000557537 1720 ntBASIC1.96□□□□□ -2.1
COL1A1P02452 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
COL1A1P02452 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.96□□□□□ -2.1
COL1A1P02452 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
COL1A1P02452 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.95□□□□□ -2.1
COL1A1P02452 SFR1P1-201ENST00000403720 688 ntBASIC1.95□□□□□ -2.1
COL1A1P02452 AC092447.6-201ENST00000414578 210 ntBASIC1.95□□□□□ -2.1
COL1A1P02452 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL1A1P02452 SNRPFP4-201ENST00000456366 242 ntBASIC1.95□□□□□ -2.1
COL1A1P02452 AMD1P1-201ENST00000457220 922 ntBASIC1.95□□□□□ -2.1
COL1A1P02452 snoU13.3-201ENST00000459441 104 ntBASIC1.95□□□□□ -2.1
COL1A1P02452 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.95□□□□□ -2.1
COL1A1P02452 AC010625.1-201ENST00000511296 403 ntBASIC1.95□□□□□ -2.1
COL1A1P02452 AC016065.2-201ENST00000514530 444 ntBASIC1.95□□□□□ -2.1
COL1A1P02452 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.95□□□□□ -2.1
COL1A1P02452 AC087441.2-201ENST00000529141 262 ntBASIC1.95□□□□□ -2.1
COL1A1P02452 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.95□□□□□ -2.1
COL1A1P02452 SNORD53B-201ENST00000577887 78 ntBASIC1.95□□□□□ -2.1
COL1A1P02452 MIR3618-201ENST00000580330 88 ntBASIC1.95□□□□□ -2.1
COL1A1P02452 AL360085.1-201ENST00000604713 532 ntBASIC1.95□□□□□ -2.1
COL1A1P02452 AP005212.4-201ENST00000614206 710 ntBASIC1.95□□□□□ -2.1
COL1A1P02452 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
COL1A1P02452 AL391987.6-201ENST00000305671 199 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 RNU4-52P-201ENST00000384209 138 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 RNU6-31P-201ENST00000384388 108 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 MCTS2P-201ENST00000394552 546 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 AL035405.1-201ENST00000400795 710 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 AL356057.2-201ENST00000403318 432 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.94□□□□□ -2.1
COL1A1P02452 RPS3AP9-201ENST00000417027 792 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 BX510359.4-201ENST00000423750 193 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 HMGN2P38-201ENST00000423806 265 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 HMGN2P19-201ENST00000425149 265 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 AL392003.1-201ENST00000434394 243 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.94□□□□□ -2.1
COL1A1P02452 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.94□□□□□ -2.1
COL1A1P02452 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.94□□□□□ -2.1
COL1A1P02452 RNA5SP310-201ENST00000459084 116 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.94□□□□□ -2.1
COL1A1P02452 AC015908.1-201ENST00000478739 476 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 AC090096.1-201ENST00000489168 390 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.94□□□□□ -2.1
COL1A1P02452 RNA5SP364-201ENST00000516938 78 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.94□□□□□ -2.1
COL1A1P02452 AC008562.1-201ENST00000521763 330 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 AC004923.2-201ENST00000529649 369 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.94□□□□□ -2.1
COL1A1P02452 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.94□□□□□ -2.1
COL1A1P02452 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.94□□□□□ -2.1
COL1A1P02452 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.94□□□□□ -2.1
COL1A1P02452 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.94□□□□□ -2.1
COL1A1P02452 OR4G1P-201ENST00000588632 938 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 HMGB1P51-201ENST00000605166 638 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 PVT1_3.1-201ENST00000620853 95 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 AL158801.5-201ENST00000623123 465 ntBASIC1.94□□□□□ -2.1
COL1A1P02452 AC095031.1-201ENST00000623685 672 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms