Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.64□□□□□ -2.15
TNFP01375 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.64□□□□□ -2.15
TNFP01375 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.64□□□□□ -2.15
TNFP01375 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TNFP01375 GLYCAM1-201ENST00000546596 285 ntBASIC1.64□□□□□ -2.15
TNFP01375 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.64□□□□□ -2.15
TNFP01375 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.64□□□□□ -2.15
TNFP01375 AL355812.1-201ENST00000603215 216 ntBASIC1.64□□□□□ -2.15
TNFP01375 KATNBL1P1-201ENST00000605192 748 ntBASIC1.64□□□□□ -2.15
TNFP01375 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.64□□□□□ -2.15
TNFP01375 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TNFP01375 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TNFP01375 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TNFP01375 RNU1-105P-201ENST00000363470 161 ntBASIC1.63□□□□□ -2.15
TNFP01375 SNORA17.3-201ENST00000391159 129 ntBASIC1.63□□□□□ -2.15
TNFP01375 AL021407.1-201ENST00000404531 386 ntBASIC1.63□□□□□ -2.15
TNFP01375 RNA5SP56-201ENST00000410277 118 ntBASIC1.63□□□□□ -2.15
TNFP01375 AL358453.1-201ENST00000422522 250 ntBASIC1.63□□□□□ -2.15
TNFP01375 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.63□□□□□ -2.15
TNFP01375 RPL23AP76-201ENST00000441860 458 ntBASIC1.63□□□□□ -2.15
TNFP01375 OR6K5P-201ENST00000447050 945 ntBASIC1.63□□□□□ -2.15
TNFP01375 TPT1P14-201ENST00000448018 505 ntBASIC1.63□□□□□ -2.15
TNFP01375 RPL31P53-201ENST00000457065 348 ntBASIC1.63□□□□□ -2.15
TNFP01375 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.63□□□□□ -2.15
TNFP01375 AC079203.1-201ENST00000487972 404 ntBASIC1.63□□□□□ -2.15
TNFP01375 MTCO2P9-201ENST00000503214 694 ntBASIC1.63□□□□□ -2.15
TNFP01375 AP001960.1-201ENST00000506494 658 ntBASIC1.63□□□□□ -2.15
TNFP01375 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.63□□□□□ -2.15
TNFP01375 COL6A4P2-205ENST00000509855 506 ntBASIC1.63□□□□□ -2.15
TNFP01375 HMGB1P47-201ENST00000511281 589 ntBASIC1.63□□□□□ -2.15
TNFP01375 AC083923.1-201ENST00000523708 376 ntBASIC1.63□□□□□ -2.15
TNFP01375 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.63□□□□□ -2.15
TNFP01375 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.63□□□□□ -2.15
TNFP01375 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TNFP01375 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.63□□□□□ -2.15
TNFP01375 AC073111.2-201ENST00000605657 1075 ntBASIC1.63□□□□□ -2.15
TNFP01375 AC025016.1-201ENST00000616746 682 ntBASIC1.63□□□□□ -2.15
TNFP01375 AL162373.1-201ENST00000620433 407 ntBASIC1.63□□□□□ -2.15
TNFP01375 AC097372.4-201ENST00000625025 466 ntBASIC1.63□□□□□ -2.15
TNFP01375 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.63□□□□□ -2.15
TNFP01375 BX649567.1-201ENST00000642071 1134 ntBASIC1.63□□□□□ -2.15
TNFP01375 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
TNFP01375 RNA5SP27-201ENST00000363839 119 ntBASIC1.62□□□□□ -2.15
TNFP01375 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TNFP01375 AL030996.1-201ENST00000411430 235 ntBASIC1.62□□□□□ -2.15
TNFP01375 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.62□□□□□ -2.15
TNFP01375 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.62□□□□□ -2.15
TNFP01375 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.62□□□□□ -2.15
TNFP01375 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC1.62□□□□□ -2.15
TNFP01375 AL451074.3-201ENST00000437709 472 ntBASIC1.62□□□□□ -2.15
TNFP01375 SDCBPP1-201ENST00000440192 890 ntBASIC1.62□□□□□ -2.15
TNFP01375 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.62□□□□□ -2.15
TNFP01375 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.62□□□□□ -2.15
TNFP01375 ANKRD26P4-201ENST00000455755 950 ntBASIC1.62□□□□□ -2.15
TNFP01375 RN7SKP210-201ENST00000459176 261 ntBASIC1.62□□□□□ -2.15
TNFP01375 AC021146.7-201ENST00000509604 775 ntBASIC1.62□□□□□ -2.15
TNFP01375 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.62□□□□□ -2.15
TNFP01375 PRELID3BP4-201ENST00000515476 571 ntBASIC1.62□□□□□ -2.15
TNFP01375 AC139103.1-201ENST00000534696 1030 ntBASIC1.62□□□□□ -2.15
TNFP01375 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.62□□□□□ -2.15
TNFP01375 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.62□□□□□ -2.15
TNFP01375 MIR3609-201ENST00000582661 80 ntBASIC1.62□□□□□ -2.15
TNFP01375 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.62□□□□□ -2.15
TNFP01375 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.62□□□□□ -2.15
TNFP01375 AC107214.2-201ENST00000608204 634 ntBASIC1.62□□□□□ -2.15
TNFP01375 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
TNFP01375 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.62□□□□□ -2.15
TNFP01375 AC012150.2-201ENST00000621300 544 ntBASIC1.62□□□□□ -2.15
TNFP01375 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TNFP01375 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.62□□□□□ -2.15
TNFP01375 CR848007.1-201ENST00000442354 1699 ntBASIC1.61□□□□□ -2.15
TNFP01375 AC123912.3-201ENST00000600907 1367 ntBASIC1.61□□□□□ -2.15
TNFP01375 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
TNFP01375 AC087359.1-201ENST00000508335 1740 ntBASIC1.61□□□□□ -2.15
TNFP01375 AL137003.2-201ENST00000606924 2538 ntBASIC1.61□□□□□ -2.15
TNFP01375 SNORA68.1-201ENST00000364537 132 ntBASIC1.61□□□□□ -2.15
TNFP01375 MIR676-201ENST00000390702 67 ntBASIC1.61□□□□□ -2.15
TNFP01375 CIR1P3-201ENST00000405137 479 ntBASIC1.61□□□□□ -2.15
TNFP01375 MTATP6P31-201ENST00000406985 692 ntBASIC1.61□□□□□ -2.15
TNFP01375 RNU4-74P-201ENST00000411280 161 ntBASIC1.61□□□□□ -2.15
TNFP01375 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TNFP01375 RPL7L1P10-201ENST00000427790 463 ntBASIC1.61□□□□□ -2.15
TNFP01375 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.61□□□□□ -2.15
TNFP01375 ARPC3P1-201ENST00000437218 533 ntBASIC1.61□□□□□ -2.15
TNFP01375 AC004022.1-201ENST00000447766 1066 ntBASIC1.61□□□□□ -2.15
TNFP01375 TRGVB-201ENST00000453257 471 ntBASIC1.61□□□□□ -2.15
TNFP01375 AC104689.1-201ENST00000473356 768 ntBASIC1.61□□□□□ -2.15
TNFP01375 AC109464.2-201ENST00000510242 943 ntBASIC1.61□□□□□ -2.15
TNFP01375 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TNFP01375 RN7SKP96-201ENST00000516948 297 ntBASIC1.61□□□□□ -2.15
TNFP01375 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.61□□□□□ -2.15
TNFP01375 AC004923.2-201ENST00000529649 369 ntBASIC1.61□□□□□ -2.15
TNFP01375 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.61□□□□□ -2.15
TNFP01375 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.61□□□□□ -2.15
TNFP01375 SNORD53B-201ENST00000577887 78 ntBASIC1.61□□□□□ -2.15
TNFP01375 AC012493.3-201ENST00000604494 112 ntBASIC1.61□□□□□ -2.15
TNFP01375 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.61□□□□□ -2.15
TNFP01375 ZNF876P-202ENST00000398732 1485 ntBASIC1.61□□□□□ -2.15
TNFP01375 RNU6-198P-201ENST00000384258 104 ntBASIC1.6□□□□□ -2.15
TNFP01375 U8.10-201ENST00000384260 133 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms