Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 RNU1-51P-201ENST00000365345 176 ntBASIC1.84□□□□□ -2.11
LTAP01374 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.84□□□□□ -2.11
LTAP01374 RNU6-1122P-201ENST00000384449 107 ntBASIC1.84□□□□□ -2.11
LTAP01374 Y_RNA.548-201ENST00000384656 105 ntBASIC1.84□□□□□ -2.11
LTAP01374 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.84□□□□□ -2.11
LTAP01374 AL161449.1-201ENST00000414531 1199 ntBASIC1.84□□□□□ -2.11
LTAP01374 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.84□□□□□ -2.11
LTAP01374 ZNF863P-201ENST00000426746 417 ntBASIC1.84□□□□□ -2.11
LTAP01374 MTND4P6-201ENST00000438297 472 ntBASIC1.84□□□□□ -2.11
LTAP01374 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.84□□□□□ -2.11
LTAP01374 OR10R1P-201ENST00000441524 1141 ntBASIC1.84□□□□□ -2.11
LTAP01374 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
LTAP01374 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.84□□□□□ -2.11
LTAP01374 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.84□□□□□ -2.11
LTAP01374 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.84□□□□□ -2.11
LTAP01374 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.84□□□□□ -2.11
LTAP01374 RNU7-26P-201ENST00000458980 63 ntBASIC1.84□□□□□ -2.11
LTAP01374 RPS20P20-201ENST00000460498 340 ntBASIC1.84□□□□□ -2.11
LTAP01374 MRPS17P3-201ENST00000465453 385 ntBASIC1.84□□□□□ -2.11
LTAP01374 AC107626.1-201ENST00000471084 183 ntBASIC1.84□□□□□ -2.11
LTAP01374 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.84□□□□□ -2.11
LTAP01374 FAM172BP-201ENST00000487497 1089 ntBASIC1.84□□□□□ -2.11
LTAP01374 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.84□□□□□ -2.11
LTAP01374 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.84□□□□□ -2.11
LTAP01374 HMGB1P28-201ENST00000507778 552 ntBASIC1.84□□□□□ -2.11
LTAP01374 NDUFB4P2-201ENST00000509515 391 ntBASIC1.84□□□□□ -2.11
LTAP01374 AC074250.1-201ENST00000511117 192 ntBASIC1.84□□□□□ -2.11
LTAP01374 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.84□□□□□ -2.11
LTAP01374 RNU1-104P-201ENST00000517280 175 ntBASIC1.84□□□□□ -2.11
LTAP01374 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.84□□□□□ -2.11
LTAP01374 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.84□□□□□ -2.11
LTAP01374 AC109329.2-201ENST00000519658 482 ntBASIC1.84□□□□□ -2.11
LTAP01374 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.84□□□□□ -2.11
LTAP01374 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
LTAP01374 DEFB130C-202ENST00000530001 230 ntBASIC1.84□□□□□ -2.11
LTAP01374 OR4R2P-201ENST00000530815 597 ntBASIC1.84□□□□□ -2.11
LTAP01374 AC087894.1-201ENST00000538359 518 ntBASIC1.84□□□□□ -2.11
LTAP01374 AC079600.2-201ENST00000550076 130 ntBASIC1.84□□□□□ -2.11
LTAP01374 AC078814.3-201ENST00000553036 491 ntBASIC1.84□□□□□ -2.11
LTAP01374 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
LTAP01374 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.84□□□□□ -2.11
LTAP01374 AC023825.1-201ENST00000566704 1030 ntBASIC1.84□□□□□ -2.11
LTAP01374 AC034105.4-201ENST00000568304 277 ntBASIC1.84□□□□□ -2.11
LTAP01374 MIR3616-201ENST00000584070 92 ntBASIC1.84□□□□□ -2.11
LTAP01374 MIR4658-201ENST00000584344 65 ntBASIC1.84□□□□□ -2.11
LTAP01374 AC012493.2-201ENST00000595083 291 ntBASIC1.84□□□□□ -2.11
LTAP01374 AC135507.1-201ENST00000607214 561 ntBASIC1.84□□□□□ -2.11
LTAP01374 AC067747.1-201ENST00000608026 250 ntBASIC1.84□□□□□ -2.11
LTAP01374 AC008498.1-201ENST00000613012 531 ntBASIC1.84□□□□□ -2.11
LTAP01374 AC013476.2-201ENST00000614456 459 ntBASIC1.84□□□□□ -2.11
LTAP01374 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.84□□□□□ -2.11
LTAP01374 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.84□□□□□ -2.11
LTAP01374 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.84□□□□□ -2.11
LTAP01374 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
LTAP01374 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.84□□□□□ -2.12
LTAP01374 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
LTAP01374 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
LTAP01374 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.83□□□□□ -2.12
LTAP01374 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LTAP01374 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
LTAP01374 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
LTAP01374 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
LTAP01374 MIRLET7G-201ENST00000362280 84 ntBASIC1.83□□□□□ -2.12
LTAP01374 SNORD114-30-201ENST00000364448 72 ntBASIC1.83□□□□□ -2.12
LTAP01374 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
LTAP01374 MIR134-201ENST00000385258 73 ntBASIC1.83□□□□□ -2.12
LTAP01374 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
LTAP01374 AL109755.1-201ENST00000401791 649 ntBASIC1.83□□□□□ -2.12
LTAP01374 TPMTP2-201ENST00000414372 726 ntBASIC1.83□□□□□ -2.12
LTAP01374 AC091390.3-201ENST00000426478 338 ntBASIC1.83□□□□□ -2.12
LTAP01374 MTATP6P11-201ENST00000428071 670 ntBASIC1.83□□□□□ -2.12
LTAP01374 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.83□□□□□ -2.12
LTAP01374 RPS24P13-201ENST00000442520 397 ntBASIC1.83□□□□□ -2.12
LTAP01374 AL135938.1-201ENST00000443141 297 ntBASIC1.83□□□□□ -2.12
LTAP01374 AC233279.1-201ENST00000455300 423 ntBASIC1.83□□□□□ -2.12
LTAP01374 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.83□□□□□ -2.12
LTAP01374 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.83□□□□□ -2.12
LTAP01374 AC105252.1-201ENST00000503089 286 ntBASIC1.83□□□□□ -2.12
LTAP01374 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.83□□□□□ -2.12
LTAP01374 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.83□□□□□ -2.12
LTAP01374 AC096725.1-201ENST00000514266 313 ntBASIC1.83□□□□□ -2.12
LTAP01374 SCARNA17.1-201ENST00000516211 143 ntBASIC1.83□□□□□ -2.12
LTAP01374 RNA5SP341-201ENST00000516261 117 ntBASIC1.83□□□□□ -2.12
LTAP01374 SCARNA17.2-201ENST00000516334 143 ntBASIC1.83□□□□□ -2.12
LTAP01374 RNU6-1225P-201ENST00000516336 65 ntBASIC1.83□□□□□ -2.12
LTAP01374 RNA5SP82-201ENST00000516707 92 ntBASIC1.83□□□□□ -2.12
LTAP01374 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.83□□□□□ -2.12
LTAP01374 NDUFS5P6-201ENST00000529136 295 ntBASIC1.83□□□□□ -2.12
LTAP01374 OR4R1P-201ENST00000529879 463 ntBASIC1.83□□□□□ -2.12
LTAP01374 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.83□□□□□ -2.12
LTAP01374 AC005951.2-201ENST00000576282 495 ntBASIC1.83□□□□□ -2.12
LTAP01374 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.83□□□□□ -2.12
LTAP01374 MIR3158-1-201ENST00000583596 81 ntBASIC1.83□□□□□ -2.12
LTAP01374 AC061975.8-201ENST00000587058 721 ntBASIC1.83□□□□□ -2.12
LTAP01374 AL161756.2-201ENST00000604597 246 ntBASIC1.83□□□□□ -2.12
LTAP01374 OR10AB1P-201ENST00000609613 938 ntBASIC1.83□□□□□ -2.12
LTAP01374 SCARNA17.4-201ENST00000614296 143 ntBASIC1.83□□□□□ -2.12
LTAP01374 AC012314.7-201ENST00000619693 93 ntBASIC1.83□□□□□ -2.12
LTAP01374 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.83□□□□□ -2.12
LTAP01374 AL359693.1-201ENST00000614959 2407 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms